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Report for CCDS90385.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90385.1 Public Mus musculus 8 Nrg1 23 108 98 CCDS HistoryNCBI Gene:211323Re-query CCDS DB by CCDS ID:90385.1Re-query CCDS DB by GeneID:211323See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90385.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000207470.2 ENSMUSP00000146456.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000207470.2Link to Ensembl Protein Viewer:ENSMUSP00000146456.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000207470Re-query CCDS DB by Protein ID:ENSMUSP00000146456
Original member NCBI NM_001364421.1 NP_001351350.1 Updated not alive Link to Nucleotide Sequence:NM_001364421.1Link to Protein Sequence:NP_001351350.1Re-query CCDS DB by Nucleotide ID:NM_001364421Re-query CCDS DB by Protein ID:NP_001351350
Current member NCBI NM_001364421.2 NP_001351350.1 Accepted alive Link to Nucleotide Sequence:NM_001364421.2Link to Protein Sequence:NP_001351350.1Re-query CCDS DB by Nucleotide ID:NM_001364421Re-query CCDS DB by Protein ID:NP_001351350Link to BLAST:NP_001351350.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001351350.1 645 Q6DR98 645 100% 0 0

Chromosomal Locations for CCDS 90385.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 31818028 31818682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 31821242 31821448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 31822227 31822357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 31824444 31824570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 31826253 31826355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 31831205 31831228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 31837670 31837728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 31849310 31849439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 31946984 31947034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 31949917 31949967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 31958512 31958633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 31968008 31968185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 32009010 32009109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1938 nt):
ATGTCTGAGCGCAAAGAAGGCAGAGGCAAGGGGAAGGGCAAGAAGAAGGACCGGGGATCCCGCGGGAAGC
CCGCGCCCGCCGAAGGCGACCCGAGCCCAGCATTGCCTCCCAGATTGAAAGAGATGAAAAGCCAGGAGTC
AGCTGCAGGCTCCAAGCTCGTGCTTCGGTGTGAAACCAGCTCTGAGTACTCCTCACTCAGATTCAAATGG
TTCAAGAACGGGAATGAGCTGAACCGTAGGAATAAACCACAAAACGTCAAGATACAGAAGAAGCCAGGGA
AGTCAGAGCTTCGAATCAACAAAGCGTCCCTGGCTGACTCTGGAGAATATATGTGCAAAGTGATCAGCAA
GTTAGGAAACGACAGTGCCTCTGCCAACATCACCATTGTTGAGTCAAACGACCTCACCACTGGCATGTCA
GCCTCAACTGAAAGACCCTATGTGTCCTCAGAGTCTCCCATTAGAATATCAGTTTCAACAGAAGGCGCAA
ATACTTCTTCATCCACATCTACATCCACGACTGGGACCAGCCATCTCATAAAGTGTGCGGAGAAGGAGAA
AACTTTCTGTGTGAATGGAGGCGAGTGCTTCATGGTGAAGGACCTGTCAAACCCCTCAAGATACTTGTGC
AAGTGCCCAAATGAGTTTACTGGTGATCGTTGCCAAAACTACGTAATGGCCAGCTTCTACAAGCATCTTG
GGATTGAATTTATGGAAGCGGAGGAGCTCTACCAGAAGAGGGTACTGACAATTACTGGCATCTGTATCGC
CCTGTTGGTGGTCGGCATCATGTGTGTGGTGGCCTACTGCAAAACCAAGAAACAGCGGCAGAAGCTTCAT
GATCGGCTCCGGCAGAGCCTTCGGTCAGAACGAAACAACATGGTGAACATAGCGAATGGCCCTCACCATC
CAAACCCACCACCAGAGAATGTGCAACTGGTGAATCAATATGTATCTAAAAACGTCATCTCCAGTGAGCA
TATTGTGGAGAGAGAAGTGGAGACCTCCTTTTCCACCAGTCACTACACTTCCACAGCTCATCACTCCACG
ACTGTCACCCAGACTCCTAGTCACAGCTGGAGTAATGGGCACACAGAAAGCATCATTTCAGAAAGCCACT
CTGTAATCATGATGTCATCGGTAGAGAACAGCAGGCACAGCAGCCCAGCTGGGGGCCCACGAGGACGTCT
TCATGGCCTGGGAGGCCCTCGCGAATGTAACAGCTTCCTCAGGCATGCCAGAGAAACCCCTGACTCCTAC
AGAGACTCTCCTCATAGTGAAAGGTATGTATCAGCCATGACCACCCCGGCTCGTATGTCACCTGTAGATT
TCCACACGCCAAGCTCCCCTAAATCGCCCCCTTCGGAAATGTCTCCACCCGTGTCCAGCATGACGGTGTC
CATGCCCTCTGTGGCAGTCAGCCCCTTTGTGGAAGAAGAGAGGCCTCTGCTTCTTGTGACGCCACCGAGG
CTACGGGAGAAGAAGTATGATCATCACCCCCAGCAACTCAACTCCTTTCATCACAACCCTGCACATCAGA
GTACCAGCCTCCCCCCTAGCCCATTGAGGATAGTGGAGGATGAGGAATACGAAACGACCCAGGAGTATGA
GCCAATTCAAGAGCCTATTAAGAAAGTCACCAATAGCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCAC
ATTGCCAATAGGTTGGAAATGGACAGCAACCCAAGTTCTGTGAGCAGTAACTCAGAAAGTGAGACAGAAG
ATGAAAGAGTAGGTGAAGATACACCATTCCTGGGCATACAGAACCCCCTGGCAGCCAGCCTTGAGGTGGC
CCCTGCCTTCCGTCTGGCTGAGAGCAGGACTAACCCAGCAGGCCGCTTCTCCACACAGGAAGAATTACAG
GCCAGGCTGTCTAGTGTAATCGCTAACCAAGACCCTATTGCTGTATAA

Translation (645 aa):
MSERKEGRGKGKGKKKDRGSRGKPAPAEGDPSPALPPRLKEMKSQESAAGSKLVLRCETSSEYSSLRFKW
FKNGNELNRRNKPQNVKIQKKPGKSELRINKASLADSGEYMCKVISKLGNDSASANITIVESNDLTTGMS
ASTERPYVSSESPIRISVSTEGANTSSSTSTSTTGTSHLIKCAEKEKTFCVNGGECFMVKDLSNPSRYLC
KCPNEFTGDRCQNYVMASFYKHLGIEFMEAEELYQKRVLTITGICIALLVVGIMCVVAYCKTKKQRQKLH
DRLRQSLRSERNNMVNIANGPHHPNPPPENVQLVNQYVSKNVISSEHIVEREVETSFSTSHYTSTAHHST
TVTQTPSHSWSNGHTESIISESHSVIMMSSVENSRHSSPAGGPRGRLHGLGGPRECNSFLRHARETPDSY
RDSPHSERYVSAMTTPARMSPVDFHTPSSPKSPPSEMSPPVSSMTVSMPSVAVSPFVEEERPLLLVTPPR
LREKKYDHHPQQLNSFHHNPAHQSTSLPPSPLRIVEDEEYETTQEYEPIQEPIKKVTNSRRAKRTKPNGH
IANRLEMDSNPSSVSSNSESETEDERVGEDTPFLGIQNPLAASLEVAPAFRLAESRTNPAGRFSTQEELQ
ARLSSVIANQDPIAV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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