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Report for CCDS90519.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90519.1 Public Mus musculus 9 Zfp809 23 108 98 CCDS HistoryNCBI Gene:235047Re-query CCDS DB by CCDS ID:90519.1Re-query CCDS DB by GeneID:235047See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90519.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000215618.1 ENSMUSP00000151180.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000215618.1Link to Ensembl Protein Viewer:ENSMUSP00000151180.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000215618Re-query CCDS DB by Protein ID:ENSMUSP00000151180
Original member Current member NCBI NM_001164624.1 NP_001158096.1 Accepted alive Link to Nucleotide Sequence:NM_001164624.1Link to Protein Sequence:NP_001158096.1Re-query CCDS DB by Nucleotide ID:NM_001164624Re-query CCDS DB by Protein ID:NP_001158096Link to BLAST:NP_001158096.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001158096.1 354 G3X9G7-2 354 100% 0 0

Chromosomal Locations for CCDS 90519.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 22225830 22225832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 22235020 22235146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 22236202 22236294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 22237675 22237784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 22238542 22239273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1065 nt):
ATGGGGTTGGTGTCCTTTGAGGATGTAGCCGTGGACTTCACCTTGGAGGAGTGGCAGGACCTGGACGCTG
CTCAGAGGACCCTGTACAGGGATGTGATGCTGGAAACCTACAGCAGCCTGGTGTTCCTGGACCCCTGCAT
TGCCAAACCTAAGTTGATCTTCAATTTGGAGCGTGGATTTGGGCCATGGAGCCTAGCAGAAGCTTCAAGC
AGGAGCCTCCCAGGTGTCCATAACGTGAGTACTCTGAGTGACACCAGCAAGAAAATTCCTAAGACACGTT
TGCGGCAACTCAGAAAAACTAACCAAAAGACACCAAGTGAAGACACGATTGAAGCAGAACTAAAGGCTCG
ACAGGAAGTCTCCAAAGGGACAACATCCCGTCATAGAAGAGCCCCCGTAAAATCTTTGTGCCGCAAGTCA
CAGAGAACCAAGAATCAGACATCATACAATGATGGGAATCTCTATGAATGTAAGGACTGCGAGAAAGTTT
TCTGTAATAATTCAACCCTAATTAAGCATTACAGAAGAACTCATAATGTGTACAAGCCCTATGAGTGTGA
TGAATGCAGTAAAATGTACTATTGGAAGTCAGACCTCACGTCTCATCAGAAAACGCACAGACAGAGGAAG
AGGATCTATGAGTGTAGCGAATGTGGAAAGGCTTTCTTCCGCAAGTCTCACCTCAATGCACATGAAAGAA
CCCATTCAGGTGAGAAGCCTTATGAATGCACAGAGTGCAGGAAAGCTTTCTATTACAAGTCTGACCTCAC
TCGACATAAGAAGACTCACCTGGGTGAAAAACCTTTTAAATGTGAAGAGTGCAAGAAAGCTTTTTCTCGA
AAGTCCAAACTCGCTATACATCAGAAGAAACATACGGGCGAGAAACCATATGAATGTACAGAATGCAAGA
AGGCTTTCTCCCATCAGTCACAACTCACTGCACATCGGATTGCTCATTCATCTGAGAATCCTTATGAATG
TAAAGAATGCAATAAATCATTCCACTGGAAGTGTCAACTCACAGCACATCAGAAAAGACACACAGGTCAG
TATGGGGATAGCTGA

Translation (354 aa):
MGLVSFEDVAVDFTLEEWQDLDAAQRTLYRDVMLETYSSLVFLDPCIAKPKLIFNLERGFGPWSLAEASS
RSLPGVHNVSTLSDTSKKIPKTRLRQLRKTNQKTPSEDTIEAELKARQEVSKGTTSRHRRAPVKSLCRKS
QRTKNQTSYNDGNLYECKDCEKVFCNNSTLIKHYRRTHNVYKPYECDECSKMYYWKSDLTSHQKTHRQRK
RIYECSECGKAFFRKSHLNAHERTHSGEKPYECTECRKAFYYKSDLTRHKKTHLGEKPFKCEECKKAFSR
KSKLAIHQKKHTGEKPYECTECKKAFSHQSQLTAHRIAHSSENPYECKECNKSFHWKCQLTAHQKRHTGQ
YGDS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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