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Report for CCDS91059.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91059.1 Public Homo sapiens 1 S100A2 24 110 108 CCDS HistoryNCBI Gene:6273Re-query CCDS DB by CCDS ID:91059.1Re-query CCDS DB by GeneID:6273See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91059.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368707.5 ENSP00000357696.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000368707.5Link to Ensembl Protein Viewer:ENSP00000357696.5Re-query CCDS DB by Nucleotide ID:ENST00000368707Re-query CCDS DB by Protein ID:ENSP00000357696
Original member Current member NCBI NM_001366406.1 NP_001353335.1 Accepted alive Link to Nucleotide Sequence:NM_001366406.1Link to Protein Sequence:NP_001353335.1Re-query CCDS DB by Nucleotide ID:NM_001366406Re-query CCDS DB by Protein ID:NP_001353335Link to BLAST:NP_001353335.1

Chromosomal Locations for CCDS 91059.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 153561567 153561591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 153563415 153563536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 153563734 153563877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (291 nt):
ATGATGTGCAGTTCTCTGGAGCAGGCGCTGGCTGTGCTGGTCACTACCTTCCACAAGTACTCCTGCCAAG
AGGGCGACAAGTTCAAGCTGAGTAAGGGGGAAATGAAGGAACTTCTGCACAAGGAGCTGCCCAGCTTTGT
GGGGCATTCCAGAGAACCATGTGCTGTGAGGGCCTTCCGAGTCCATCTGTTTAATCCTGTCATTGGAGAC
TTGAGAAACCAGAGCCCAGAAGGGAAAAGTGATTGTCCCAAGATCACACAGCACTGGAGAAAGTGGATGA
GGAGGGGCTGA

Translation (96 aa):
MMCSSLEQALAVLVTTFHKYSCQEGDKFKLSKGEMKELLHKELPSFVGHSREPCAVRAFRVHLFNPVIGD
LRNQSPEGKSDCPKITQHWRKWMRRG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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