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Report for CCDS91159.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91159.1 Public Homo sapiens 1 SLC30A10 24 110 108 CCDS HistoryNCBI Gene:55532Re-query CCDS DB by CCDS ID:91159.1Re-query CCDS DB by GeneID:55532See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91159.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000696608.1 ENSP00000512752.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000696608.1Link to Ensembl Protein Viewer:ENSP00000512752.1Re-query CCDS DB by Nucleotide ID:ENST00000696608Re-query CCDS DB by Protein ID:ENSP00000512752
Original member Current member NCBI NM_001376929.1 NP_001363858.1 Accepted alive Link to Nucleotide Sequence:NM_001376929.1Link to Protein Sequence:NP_001363858.1Re-query CCDS DB by Nucleotide ID:NM_001376929Re-query CCDS DB by Protein ID:NP_001363858Link to BLAST:NP_001363858.1

Chromosomal Locations for CCDS 91159.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 219915449 219915948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 219918255 219918494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 219927028 219927105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 219958568 219959018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1269 nt):
ATGGGGCGATACTCCGGAAGAAGCTTCCGTTTAATCCTCATGTGCGTCGTTAGCATCCTCCTCTTTGTGA
TGGAACTAGTGATCGCTTACGTTGGCAACTCCCTCTCCTTGGCCTCCGATGCTTTTGCCGTCCTTTCCCA
CTTTGTGTCCATGATCATAGGTTTTTTTGGTGTAAGGGCCAGTAACATAAAACAGCACAAGAAGAGCACT
TACGGCTTTCTTCGGGCAGATGTTGTGGGAGCATTTGGGAACACCATTTTTGCGGTGGCGCTGATGTTCA
GCATCCTGGTTGAAGCCATCAAAAGGTACATCAATCCCCAGAAGACAGAGGAGCCGATACTGGTTCTCAG
TGCTGGAATTATCGGTCTGTTCTTCAATGTTCTTAACTATGTCATCTTCTTGGACTGCTGTTACTGCGCA
GCACCCAAGCCCCAGGGAGACATGGAAGCAGGTGATTCCTTCAACACCCAGAATGAGCCAGAAGACATGA
TGAAAAAAGAGAAAAAGTCTGAAGCTCTGAATATCAGAGGTGTACTTTTGCATGTGATGGGAGATGCCCT
GGGGTCCGTGGTTGTGGTCATCACGGCCATCATATTCTATGTGCTTCCCCTGAAGAGTGAGGACCCGTGT
AACTGGCAGTGTTACATTGACCCCAGCCTGACTGTCCTCATGGTCATCATCATTTTGTCATCTGCCTTCC
CGCTTATCAAGGAGACCGCTGCCATTCTGCTACAGATGGTCCCAAAAGGAGTCAACATGGAAGAGCTGAT
GAGTAAACTCTCTGCTGTGCCTGGAATTAGCAGTGTACATGAAGTGCACATCTGGGAACTTGTAAGTGGA
AAGATTATTGCCACCCTGCACATCAAGTATCCTAAGGACAGGGGATATCAAGATGCCAGCACAAAAATTC
GAGAAATCTTCCACCATGCGGGAATCCACAATGTGACCATCCAGTTTGAAAATGTGGACTTGAAGGAACC
CCTGGAGCAGAAGGACTTACTGTTGCTCTGCAACTCACCCTGCATCTCCAAGGGCTGTGCTAAGCAGCTG
TGTTGTCCCCCCGGGGCACTGCCTCTGGCTCACGTCAATGGCTGTGCTGAGCACAATGGTGGGCCCTCTC
TAGACACATACGGAAGTGATGGCCTCAGTAGAAGAGACGCAAGAGAAGTGGCTATTGAAGTGTCTTTGGA
TAGCTGTCTGAGTGACCACGGACAAAGTCTTAACAAAACTCAGGAGGACCAATGTTATGTCAACAGAACG
CATTTTTAA

Translation (422 aa):
MGRYSGRSFRLILMCVVSILLFVMELVIAYVGNSLSLASDAFAVLSHFVSMIIGFFGVRASNIKQHKKST
YGFLRADVVGAFGNTIFAVALMFSILVEAIKRYINPQKTEEPILVLSAGIIGLFFNVLNYVIFLDCCYCA
APKPQGDMEAGDSFNTQNEPEDMMKKEKKSEALNIRGVLLHVMGDALGSVVVVITAIIFYVLPLKSEDPC
NWQCYIDPSLTVLMVIIILSSAFPLIKETAAILLQMVPKGVNMEELMSKLSAVPGISSVHEVHIWELVSG
KIIATLHIKYPKDRGYQDASTKIREIFHHAGIHNVTIQFENVDLKEPLEQKDLLLLCNSPCISKGCAKQL
CCPPGALPLAHVNGCAEHNGGPSLDTYGSDGLSRRDAREVAIEVSLDSCLSDHGQSLNKTQEDQCYVNRT
HF


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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