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Report for CCDS92194.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92194.1 Public Homo sapiens 16 ZNF23 24 110 108 CCDS HistoryNCBI Gene:7571Re-query CCDS DB by CCDS ID:92194.1Re-query CCDS DB by GeneID:7571See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92194.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000647773.2 ENSP00000497736.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000647773.2Link to Ensembl Protein Viewer:ENSP00000497736.2Re-query CCDS DB by Nucleotide ID:ENST00000647773Re-query CCDS DB by Protein ID:ENSP00000497736
Original member Current member NCBI NM_001381984.1 NP_001368913.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001381984.1Link to Protein Sequence:NP_001368913.1Re-query CCDS DB by Nucleotide ID:NM_001381984Re-query CCDS DB by Protein ID:NP_001368913Link to BLAST:NP_001368913.1

Chromosomal Locations for CCDS 92194.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 71448093 71449885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 71453243 71453350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 71454042 71454168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 71456764 71456796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2061 nt):
ATGGCAGCCATGCACCTGACAGCCTGGCCCCAGAAGTCGGTGACCTTTGAGGACGTGGCTGTGTACTTCA
CCCAGGCGGAATGGGATGGCCTGTCCCCTGCACAGAGGACCCTGTACAGGGATGTGATGCTGGAGAATTA
TGGGAATGTGGCCTCCCTGGGATTTCCACTTCTCAAACCTGCTGTGATCTCACAACTGGAGGGAGGAAGT
GAGCTGGGGGGCTCATCTCCACTGGCTGCAGGAACAGGCCTCCAGGGCCTCCAGACTGTAGATATTCAGA
CTGACAATGATTTGACAAAGGAAATGTATGAAGGAAAAGAGAATGTATCATTTGAACTTCAAAGAGACTT
TTCCCAGGAAACAGACTTTTCAGAAGCCTCTCTTCTAGAGAAACAACAGGAAGTCCACTCAGCAGGAAAT
ATAAAGAAGGAGAAGAGCAACACCATTGATGGAACAGTGAAAGATGAGACAAGCCCCGTGGAGGAGTGTT
TTTTTAGTCAAAGTTCAAACTCATATCAGTGTCATACCATCACTGGAGAGCAGCCCTCTGGGTGTACAGG
ATTGGGGAAATCCATCAGCTTTGATACAAAACTCGTGAAGCATGAAATAATTAATTCTGAGGAAAGACCT
TTCAAATGTGAAGAATTAGTAGAGCCCTTTAGGTGTGACTCTCAACTTATTCAACATCAAGAGAACAACA
CTGAGGAAAAGCCTTATCAGTGTTCGGAGTGTGGCAAAGCTTTCAGCATTAATGAGAAATTAATTTGGCA
TCAGAGACTTCACAGTGGGGAGAAACCCTTCAAATGTGTGGAGTGTGGGAAAAGCTTCAGCTACAGTTCC
CATTATATCACACATCAGACAATCCACAGTGGGGAGAAGCCCTATCAGTGTAAGATGTGTGGGAAGGCCT
TCAGTGTTAATGGAAGCCTAAGTAGGCATCAGAGAATCCATACGGGAGAGAAGCCCTATCAGTGCAAGGA
ATGTGGAAATGGCTTCAGCTGTAGTTCTGCATATATTACACATCAGAGAGTCCACACTGGAGAGAAACCT
TACGAGTGTAATGACTGTGGGAAAGCGTTCAATGTTAATGCAAAATTAATTCAACATCAGAGAATCCATA
CTGGAGAGAAACCTTATGAATGTAATGAATGTGGAAAAGGCTTCAGGTGCAGCTCCCAGCTTAGGCAGCA
TCAGAGCATCCACACAGGAGAAAAGCCCTATCAGTGTAAAGAGTGTGGAAAAGGCTTCAATAATAATACA
AAACTCATTCAGCATCAGAGAATCCACACAGGTGAGAAACCCTATGAATGCACTGAATGTGGAAAAGCCT
TCAGTGTCAAAGGGAAGTTAATCCAACACCAGAGAATTCACACAGGCGAGAAACCCTATGAGTGTAATGA
ATGCGGGAAAGCCTTCAGATGTAACTCCCAATTTCGGCAGCATCTGAGAATTCACACTGGGGAGAAGCCC
TATGAGTGTAATGAGTGTGGAAAGGCCTTCAGCGTTAATGGGAAACTAATGCGGCATCAGAGAATTCACA
CTGGGGAGAAACCTTTTGAATGTAATGAGTGTGGGAGATGCTTTACTTCTAAAAGAAACCTACTTGATCA
TCACCGAATCCATACTGGAGAAAAGCCCTATCAATGTAAGGAATGTGGGAAAGCCTTCAGTATCAATGCC
AAACTAACTAGGCATCAGAGGATACATACTGGGGAGAAACCTTTCAAATGTATGGAATGTGAGAAAGCAT
TCAGCTGTAGTTCTAACTATATTGTGCACCAGAGAATCCATACAGGAGAGAAACCCTTTCAGTGTAAGGA
GTGTGGAAAAGCCTTCCATGTTAATGCCCATTTAATTCGGCATCAGAGAAGCCACACTGGGGAGAAACCC
TTCAGATGTGTGGAATGTGGCAAAGGCTTCAGCTTTAGTTCTGACTACATTATACATCAGACAGTCCACA
CTTGGAAGAAACCCTATATGTGTAGTGTGTGTGGGAAAGCATTCAGGTTTAGCTTCCAGCTCAGTCAGCA
TCAGAGTGTCCATAGTGAAGGAAAATCCTAA

Translation (686 aa):
MAAMHLTAWPQKSVTFEDVAVYFTQAEWDGLSPAQRTLYRDVMLENYGNVASLGFPLLKPAVISQLEGGS
ELGGSSPLAAGTGLQGLQTVDIQTDNDLTKEMYEGKENVSFELQRDFSQETDFSEASLLEKQQEVHSAGN
IKKEKSNTIDGTVKDETSPVEECFFSQSSNSYQCHTITGEQPSGCTGLGKSISFDTKLVKHEIINSEERP
FKCEELVEPFRCDSQLIQHQENNTEEKPYQCSECGKAFSINEKLIWHQRLHSGEKPFKCVECGKSFSYSS
HYITHQTIHSGEKPYQCKMCGKAFSVNGSLSRHQRIHTGEKPYQCKECGNGFSCSSAYITHQRVHTGEKP
YECNDCGKAFNVNAKLIQHQRIHTGEKPYECNECGKGFRCSSQLRQHQSIHTGEKPYQCKECGKGFNNNT
KLIQHQRIHTGEKPYECTECGKAFSVKGKLIQHQRIHTGEKPYECNECGKAFRCNSQFRQHLRIHTGEKP
YECNECGKAFSVNGKLMRHQRIHTGEKPFECNECGRCFTSKRNLLDHHRIHTGEKPYQCKECGKAFSINA
KLTRHQRIHTGEKPFKCMECEKAFSCSSNYIVHQRIHTGEKPFQCKECGKAFHVNAHLIRHQRSHTGEKP
FRCVECGKGFSFSSDYIIHQTVHTWKKPYMCSVCGKAFRFSFQLSQHQSVHSEGKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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