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Report for CCDS92306.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92306.1 Public Homo sapiens 17 ZNF385C 24 110 108 CCDS HistoryNCBI Gene:201181Re-query CCDS DB by CCDS ID:92306.1Re-query CCDS DB by GeneID:201181See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 92306.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000692273.1 ENSP00000509658.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000692273.1Link to Ensembl Protein Viewer:ENSP00000509658.1Re-query CCDS DB by Nucleotide ID:ENST00000692273Re-query CCDS DB by Protein ID:ENSP00000509658
Original member Current member NCBI NM_001392013.1 NP_001378942.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001392013.1Link to Protein Sequence:NP_001378942.1Re-query CCDS DB by Nucleotide ID:NM_001392013Re-query CCDS DB by Protein ID:NP_001378942Link to BLAST:NP_001378942.1

Chromosomal Locations for CCDS 92306.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 42026897 42027133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42027618 42027728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42028050 42028246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42028783 42029073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42031619 42031784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42034225 42034335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42037737 42037885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42062807 42063056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1512 nt):
ATGAAGCGGCCACTGAGCCCACCCCCACCGGCTGAGAAGGAGACCCCCATATCTGGAGCTGCTGAGTGCC
TCCCTCGGCCCCCAGAACCACCTAAGCCCAAGCGAGAAAGAAAGCGGCCATCGTACACGCTCTGTGATGT
CTGCAACATCCAGCTGAACTCGGCGGCCCAGGCCCAGGTGCACTGTGGGGGGCGGGCCCACCAGAGGCGG
CTTCGGCAGCTCAGCTTGGGGAAGAGCCCCTCAGGGCCAGCAGGCCCGGCCTCCGGCGCCCCCAGCCCCC
TGCTGGCCTCCCTGCCCCTGCCCACCCGGCCTCTGCAGCCCCCGCTGGACTTCAAGCACTTGCTCGCCTT
CCACTTCAATGGCGCTGCCCCGCTCAGTCTCTTCCCCAACTTCAGCACGATGGACCCGGTCCAGAAAGCT
GTCATCAGCCACACGTTTGGTGTCCCCTCCCCTCTGAAGAAGAAGCTGTTCATTTCCTGTAACATCTGTC
ACCTGAGGTTCAACTCAGCGAACCAGGCCGAGGCACATTATAAAGGCCACAAACACGCCAGAAAACTCAA
GGCTGTCGAGGCTGCCAAGAGCAAGCAGAGGCCACACACCCAGGCCCAGGATGGGGCTGTAGTGTCCCCA
ATCCCAACGCTGGCCAGTGGAGCCCCTGGAGAGCCACAGAGTAAAGTTCCTGCAGCCCCTCCTCTTGGGC
CTCCACTCCAGCCACCACCAACTCCAGACCCTACATGCAGGGAGCCAGCCCACTCAGAGCTCTTGGATGC
TGCCTCCTCATCCTCTTCTTCCTCCTGCCCACCTTGCTCCCCAGAGCCTGGGAGAGAGGCACCGGGGCCT
GAGCCAGCGGCAGCTGCCGTGGGAAGCAGCATGAGTGGGGAAGGCAGGAGTGAGAAGGGGCACCTCTACT
GCCCCACGTGTAAGGTGACAGTGAACTCGGCCTCCCAGCTTCAGGCTCACAACACAGGAGCCAAGCACCG
GTGGATGATGGAAGGTCAGCGAGGGGCTCCCCGGAGGAGCCGGGGCCGCCCGGTGTCCAGGGGAGGTGCC
GGACACAAAGCCAAGAGAGTCACAGGGGGCCGGGGCGGCCGGCAGGGGCCCAGCCCTGCCTTCCACTGTG
CTCTCTGTCAGCTCCAGGTCAATTCAGAGACCCAACTGAAGCAGCACATGAGCAGCAGGAGGCACAAAGA
CCGCCTGGCCGGGAAGACCCCCAAGCCCTCCAGCCAGCACAGCAAGCTGCAGAAGCACGCAGCGCTGGCT
GTGAGTATCCTCAAGTCTAAACTGGCCTTGCAGAAGCAACTCACCAAGACGTTGGCAGCCCGCTTCCTGC
CCAGCCCGCTCCCCACCGCAGCCACTGCCATCTGTGCTCTGCCAGGGCCCCTGGCCCTCCGCCCTGCCCC
TACAGCAGCCACTACCCTCTTCCCGGCTCCCATCCTGGGCCCAGCTCTGTTTCGCACCCCAGCAGGAGCT
GTCCGCCCTGCCACAGGACCTATCGTCCTTGCCCCTTATTAG

Translation (503 aa):
MKRPLSPPPPAEKETPISGAAECLPRPPEPPKPKRERKRPSYTLCDVCNIQLNSAAQAQVHCGGRAHQRR
LRQLSLGKSPSGPAGPASGAPSPLLASLPLPTRPLQPPLDFKHLLAFHFNGAAPLSLFPNFSTMDPVQKA
VISHTFGVPSPLKKKLFISCNICHLRFNSANQAEAHYKGHKHARKLKAVEAAKSKQRPHTQAQDGAVVSP
IPTLASGAPGEPQSKVPAAPPLGPPLQPPPTPDPTCREPAHSELLDAASSSSSSSCPPCSPEPGREAPGP
EPAAAAVGSSMSGEGRSEKGHLYCPTCKVTVNSASQLQAHNTGAKHRWMMEGQRGAPRRSRGRPVSRGGA
GHKAKRVTGGRGGRQGPSPAFHCALCQLQVNSETQLKQHMSSRRHKDRLAGKTPKPSSQHSKLQKHAALA
VSILKSKLALQKQLTKTLAARFLPSPLPTAATAICALPGPLALRPAPTAATTLFPAPILGPALFRTPAGA
VRPATGPIVLAPY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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