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Report for CCDS92367.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92367.1 Public Homo sapiens 17 MTMR4 24 110 108 CCDS HistoryNCBI Gene:9110Re-query CCDS DB by CCDS ID:92367.1Re-query CCDS DB by GeneID:9110See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92367.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000682306.1 ENSP00000507664.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000682306.1Link to Ensembl Protein Viewer:ENSP00000507664.1Re-query CCDS DB by Nucleotide ID:ENST00000682306Re-query CCDS DB by Protein ID:ENSP00000507664
Original member Current member NCBI NM_001378067.1 NP_001364996.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001378067.1Link to Protein Sequence:NP_001364996.1Re-query CCDS DB by Nucleotide ID:NM_001378067Re-query CCDS DB by Protein ID:NP_001364996Link to BLAST:NP_001364996.1

Chromosomal Locations for CCDS 92367.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 58491663 58491840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58492511 58492599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58492842 58492952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58494932 58496330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58503744 58503898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58504050 58504220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58504303 58504488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58504779 58504974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58505472 58505583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58506743 58506871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58507123 58507319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58508161 58508274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58508468 58508564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58508681 58508841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58511429 58511511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58512390 58512506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58512852 58512941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58514363 58514407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3630 nt):
ATGAGCCTGACCGCCCGCGTCTCCTGCTCCATGCTTAGCTGCTTCGGTGAGGAGGGGCCCCCCAGCCTGG
AGTACATCCAAGCCAAGGATCTGTTCCCCCCCAAGGAACTAGTGAAGGAGGAAGAGAATCTTCAGGTCCC
CTTCACAGTGCTGCAGGGTGAGGGAGTAGAGTTCCTGGGCCGGGCAGCCGATGCCCTCATTGCCATCTCT
AACTACCGGCTGCATATCAAATTCAAGGACTCTGTCATCAACGTCCCCCTCCGGATGATTGACAGTGTGG
AGAGCCGTGATATGTTCCAGTTGCACATTTCCTGCAAGGACTCCAAAGTGGTGAGGTGCCACTTCTCCAC
TTTTAAGCAGTGCCAAGAGTGGCTCTCACGGCTAAGCCGAGCCACAGCAAGACCTGCCAAGCCTGAAGAC
CTCTTTGCCTTTGCCTACCATGCCTGGTGCCTGGGGCTGACCGAGGAGGACCAGCACACTCACCTATGTC
AGCCAGGTGAGCACATACGTTGTCGACAGGAGGCGGAGCTTGCAAGGATGGGCTTTGACCTGCAGAACGT
CTGGAGAGTCTCACACATCAACAGCAACTACAAATTGTGCCCCAGTTACCCCCAGAAGCTGCTGGTTCCT
GTGTGGATCACTGACAAAGAGCTGGAGAACGTGGCTTCCTTCCGCTCCTGGAAGCGGATTCCCGTGGTTG
TGTATAGACACTTGCGCAATGGGGCTGCCATCGCCCGCTGCAGCCAGCCAGAGATCAGCTGGTGGGGCTG
GCGCAATGCTGATGATGAGTACCTGGTCACGTCCATTGCTAAAGCCTGTGCCCTGGACCCGGGGACAAGG
GCCACTGGGGGCTCCCTCAGCACCGGGAATAATGATACCAGCGAGGCGTGTGATGCTGACTTTGATTCTT
CTCTGACTGCGTGCTCTGGAGTGGAGAGCACAGCAGCTCCTCAAAAGCTGCTGATCCTGGATGCGCGATC
CTACACGGCAGCAGTGGCCAACCGGGCCAAGGGTGGAGGCTGTGAATGTGAAGAGTACTATCCCAACTGT
GAGGTCGTGTTCATGGGAATGGCCAACATCCATGCCATCCGGAACAGCTTTCAGTACCTCCGGGCTGTGT
GTAGCCAGATGCCGGATCCTAGCAACTGGTTGTCGGCACTGGAGAGTACCAAATGGCTGCAGCACTTGTC
GGTGATGCTAAAAGCAGCTGTGCTGGTGGCTAATACAGTAGACCGGGAAGGCCGGCCTGTGCTGGTACAC
TGCTCAGATGGCTGGGACCGCACACCGCAGATCGTAGCCCTGGCCAAAATATTACTGGACCCATATTACA
GGACGTTGGAGGGCTTCCAAGTGTTAGTGGAGTCTGACTGGCTGGATTTTGGGCACAAGTTTGGAGATCG
CTGTGGCCACCAAGAGAATGTGGAGGACCAAAACGAACAATGCCCTGTGTTCCTCCAGTGGCTTGATTCT
GTTCATCAGTTGCTTAAGCAGTTCCCCTGCCTGTTTGAATTTAATGAAGCATTCCTGGTAAAACTGGTGC
AACACACATACTCCTGCCTCTACGGCACCTTCCTGGCCAACAACCCCTGTGAGCGAGAGAAGCGCAACAT
CTACAAGCGGACCTGCTCTGTGTGGGCGCTCCTTCGAGCTGGCAATAAAAACTTTCATAACTTCCTCTAC
ACACCCAGCTCAGACATGGTCCTGCATCCTGTTTGTCATGTCCGGGCCCTGCACCTCTGGACAGCTGTTT
ATCTGCCAGCATCATCTCCATGCACACTTGGGGAAGAAAACATGGATCTTTACCTTTCCCCAGTGGCCCA
GAGCCAGGAGTTCTCTGGCCGCTCTCTGGACAGATTACCTAAAACCAGATCCATGGATGATCTTCTTTCT
GCCTGTGACACAAGCAGCCCCCTGACTCGTACATCCAGTGACCCTAACCTGAATAACCACTGTCAGGAGG
TCAGGGTAGGCCTGGAGCCCTGGCACAGCAATCCTGAGGGATCAGAGACAAGCTTTGTGGACTCTGGGGT
AGGAGGGCCTCAGCAAACTGTAGGAGAAGTGGGTCTTCCTCCTCCTCTGCCCAGCAGCCAGAAAGACTAC
TTGAGCAATAAACCTTTCAAGAGTCACAAAAGCTGTTCTCCAAGTTACAAACTGCTTAATACCGCAGTGC
CTCGGGAAATGAAGAGCAACACCTCTGATCCTGAGATCAAAGTCCTAGAAGAGACTAAGGGACCAGCTCC
AGACCCTTCTGCCCAGGATGAGCTGGGTAGGACTTTAGATGGCATAGGGGAGCCACCTGAACATTGTCCT
GAAACAGAAGCTGTCAGTGCACTCTCCAAGGTCATTTCTAACAAGTGTGATGGAGTTTGTAATTTTCCTG
AGTCTTCCCAGAACTCTCCTACAGGTACGCCCCAACAGGCCCAGCCAGACTCCATGCTAGGTGTGCCCTC
CAAGTGTGTTCTTGATCACAGCCTCAGCACCGTTTGCAACCCACCGAGTGCTGCCTGCCAAACTCCTCTA
GACCCAAGCACTGACTTCCTCAACCAAGATCCCTCAGGGTCTGTGGCAAGTATCTCCCACCAGGAACAAC
TGAGTTCTGTGCCGGATCTGACCCATGGGGAGGAAGACATTGGTAAAAGAGGAAATAATAGGAATGGGCA
GTTATTGGAAAATCCTCGCTTTGGGAAAATGCCATTGGAATTGGTCCGGAAGCCAATTTCTCAGAGCCAG
ATCAGTGAGTTCTCTTTTCTAGGGTCCAACTGGGACAGCTTCCAAGGGATGGTGACTTCATTCCCAAGTG
GGGAGGCCACCCCTCGGCGGCTGCTTTCCTATGGCTGTTGTAGCAAGAGGCCAAACAGTAAGCAGATGCG
GGCCACAGGGCCCTGCTTTGGGGGCCAGTGGGCTCAGAGAGAAGGTGTGAAGTCACCTGTCTGTTCTAGT
CATTCCAATGGACATTGTACTGGCCCAGGAGGAAAGAACCAGATGTGGTTGTCCAGTCATCCAAAGCAAG
TCTCTAGCACAAAGCCCGTTCCACTGAACTGCCCTTCTCCAGTGCCTCCTCTGTATTTGGATGATGATGG
ACTCCCCTTTCCCACGGATGTGATCCAGCATAGGTTACGGCAAATCGAAGCAGGGTACAAACAAGAGGTG
GAGCAGCTACGTCGACAGGTGCGTGAGCTTCAGATGAGGCTGGACATCCGTCACTGCTGTGCCCCTCCAG
CAGAGCCCCCCATGGACTATGAGGATGATTTTACATGTTTGAAGGAGTCAGATGGCAGTGATACTGAGGA
TTTTGGCTCTGATCACAGTGAAGACTGCCTTTCAGAAGCAAGCTGGGAACCTGTTGATAAGAAAGAGACT
GAGGTGACTCGCTGGGTTCCAGACCATATGGCATCACACTGCTATAACTGTGACTGTGAATTCTGGTTGG
CCAAACGAAGACACCATTGCAGAAATTGTGGGAATGTATTTTGTGCTGGATGCTGCCACCTGAAGCTGCC
CATTCCTGATCAGCAACTCTATGACCCAGTTCTCGTCTGTAACTCATGTTACGAACACATTCAAGTCTCT
CGTGCCAGGGAACTCATGAGCCAACAGCTGAAGAAACCCATTGCTACAGCTTCCAGTTGA

Translation (1209 aa):
MSLTARVSCSMLSCFGEEGPPSLEYIQAKDLFPPKELVKEEENLQVPFTVLQGEGVEFLGRAADALIAIS
NYRLHIKFKDSVINVPLRMIDSVESRDMFQLHISCKDSKVVRCHFSTFKQCQEWLSRLSRATARPAKPED
LFAFAYHAWCLGLTEEDQHTHLCQPGEHIRCRQEAELARMGFDLQNVWRVSHINSNYKLCPSYPQKLLVP
VWITDKELENVASFRSWKRIPVVVYRHLRNGAAIARCSQPEISWWGWRNADDEYLVTSIAKACALDPGTR
ATGGSLSTGNNDTSEACDADFDSSLTACSGVESTAAPQKLLILDARSYTAAVANRAKGGGCECEEYYPNC
EVVFMGMANIHAIRNSFQYLRAVCSQMPDPSNWLSALESTKWLQHLSVMLKAAVLVANTVDREGRPVLVH
CSDGWDRTPQIVALAKILLDPYYRTLEGFQVLVESDWLDFGHKFGDRCGHQENVEDQNEQCPVFLQWLDS
VHQLLKQFPCLFEFNEAFLVKLVQHTYSCLYGTFLANNPCEREKRNIYKRTCSVWALLRAGNKNFHNFLY
TPSSDMVLHPVCHVRALHLWTAVYLPASSPCTLGEENMDLYLSPVAQSQEFSGRSLDRLPKTRSMDDLLS
ACDTSSPLTRTSSDPNLNNHCQEVRVGLEPWHSNPEGSETSFVDSGVGGPQQTVGEVGLPPPLPSSQKDY
LSNKPFKSHKSCSPSYKLLNTAVPREMKSNTSDPEIKVLEETKGPAPDPSAQDELGRTLDGIGEPPEHCP
ETEAVSALSKVISNKCDGVCNFPESSQNSPTGTPQQAQPDSMLGVPSKCVLDHSLSTVCNPPSAACQTPL
DPSTDFLNQDPSGSVASISHQEQLSSVPDLTHGEEDIGKRGNNRNGQLLENPRFGKMPLELVRKPISQSQ
ISEFSFLGSNWDSFQGMVTSFPSGEATPRRLLSYGCCSKRPNSKQMRATGPCFGGQWAQREGVKSPVCSS
HSNGHCTGPGGKNQMWLSSHPKQVSSTKPVPLNCPSPVPPLYLDDDGLPFPTDVIQHRLRQIEAGYKQEV
EQLRRQVRELQMRLDIRHCCAPPAEPPMDYEDDFTCLKESDGSDTEDFGSDHSEDCLSEASWEPVDKKET
EVTRWVPDHMASHCYNCDCEFWLAKRRHHCRNCGNVFCAGCCHLKLPIPDQQLYDPVLVCNSCYEHIQVS
RARELMSQQLKKPIATASS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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