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Report for CCDS92534.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92534.1 Public Homo sapiens 19 ZSWIM4 24 110 108 CCDS HistoryNCBI Gene:65249Re-query CCDS DB by CCDS ID:92534.1Re-query CCDS DB by GeneID:65249See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92534.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000590508.6 ENSP00000468285.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000590508.6Link to Ensembl Protein Viewer:ENSP00000468285.2Re-query CCDS DB by Nucleotide ID:ENST00000590508Re-query CCDS DB by Protein ID:ENSP00000468285
Original member Current member NCBI NM_001367834.3 NP_001354763.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001367834.3Link to Protein Sequence:NP_001354763.1Re-query CCDS DB by Nucleotide ID:NM_001367834Re-query CCDS DB by Protein ID:NP_001354763Link to BLAST:NP_001354763.1

Chromosomal Locations for CCDS 92534.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 13795649 13795801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13799720 13799921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13804792 13805148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13808836 13808984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13809070 13809220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13812997 13813164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13814515 13814865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13817216 13817353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13817722 13817976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13819357 13819492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13823346 13823500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13825550 13825713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13828645 13828726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13830191 13831050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3321 nt):
ATGGAACCCCCCGCGGCCAAGCGGAGCCGGGGCTGCCCCGCGGGACCCGAGGAGCGCGATGCCGGGGCCG
GGGCCGCGCGTGGCCGGGGCCGGCCCGAGGCGCTGCTGGACCTCAGCGCCAAGCGGGTAGCCGAGAGCTG
GGCCTTCGAGCAGGTGGAGGAGCGGTTCTCCCGGGTGCCTGAGCCCGTCCAGAAGCGCATCGTGTTTTGG
TCGTTTCCACGCAGTGAACGGGAAATATGTATGTACTCGTCGCTGGGTTACCCGCCCCCAGAGGGCGAGC
ACGATGCCCGGGTGCCCTTTACCCGCGGGCTGCACCTGCTCCAGAGCGGGGCCGTGGACCGCGTGTTGCA
AGTGGGATTCCACCTGAGCGGAAACATCCGCGAGCCAGGGAGTCCTGGAGAGCCCGAGCGCCTCTACCAT
GTCTCCATCAGCTTTGATCGCTGCAAGATCACGTCCGTGAGCTGCGGCTGTGACAACCGCGACCTCTTCT
ACTGTGCCCACGTGGTGGCCCTGTCCCTGTACCGCATTCGGCACGCCCACCAGGTGGAGCTGCGGCTGCC
CATCTCCGAGACGCTCTCCCAGATGAACCGGGACCAGCTGCAGAAGTTCGTGCAGTACCTCATCAGCGCC
CATCACACTGAGGTGCTGCCCACTGCTCAGCGCTTGGCTGATGAGATCCTCCTGCTGGGCTCCGAGATCA
ACTTGGTGAATGGTGCCCCAGACCCCACCGCCGGCGCAGGAATCGAGGACGCCAACTGCTGGCACCTGGA
CGAGGAGCAGATCCAGGAGCAGGTGAAGCAGCTACTGTCCAATGGCGGCTACTACGGGGCCAGCCAGCAG
CTGCGCTCCATGTTCAGCAAGGTGCGGGAGATGCTGCGAATGCGGGACTCCAACGGGGCGCGCATGCTGA
TTCTCATGACCGAGCAGTTCCTGCAGGACACGCGCCTGGCCCTGTGGCGGCAGCAGGGCGCGGGCATGAC
GGACAAGTGCCGGCAGCTCTGGGATGAGCTGGGGGCCCTGTGGGTTTGCGTCGTCCTGAGCCCCCACTGC
AAACCAGAGGAAAGGGCAGGCTGGCTCCAGCTACTCAGCAGGTGGGACAAGCTCGACGTCTGCCCACTGG
AAGAGGGCAACTACTCCTTCGACGGCCCCAGCCTGCAGCCCACCATGGCCCCCGCCCCAGGCTCGGAGGA
AGAGGAAGAGGTGGCAGCCACAAGTCCCCGCCACACGGTATTTGGCCGCGCCTTGCTGGCTGGAGAGCTA
CACTGGAATGACGCCTACCTGCAGAGGATCCTGGCCAGTGACTCCTACGGGCCCAGCCTCACAGGCAGCG
TGGGTGGGGACAAACCGACTTTCGACCCCCAGGGCCGCCCACTGTGGCTGGGAGAACCTTTCCCCACTGC
CTGTGCCCGTGTGGACACCCTGCGTGCCCACGGATACCCCCGCCAGGCCCTGCGGCTGGCAAGTGCCATC
ATCAACACACTCCGGCTGCAGCAGCGGCATCAGCTAGAGAGCTACAAGCAGCAGAAAAAAGAGCTGCTCC
AGAAGGGCTCCACCTGCATCACCAACACCGAAGGATGGGTGGGGCACCCCCTGGACCCCATTGGCTGCCT
CTGCAGGGCGCTCCTGGAGGCCTGTCGTCTGGAGGAGGAGACACTTACCCTTTACCCAGACTCAGGCCCC
GAGAAGCGGAAGGTGGCCTACCAGCACGTGCCTGTGCCCGGGAGCCCTGGGGAGTCCTACTTGGTGCTGG
CGCTGGAGGTGGCACTGCTGGGGCTGGGGCAGCAGCGGGCCCTGCCGGAGGGGCTGTACGCCCAGGACAA
GGTGGTGCGCAACGAGGAGCAGCTGCTGGCCCTGCTGGAGGAGGTGGAGTTGGATGAGCGGTTGGTGCAG
GTGCTGCGCAAGCAGGCGGGGCTGCTGCTGGAAGGGGGTCCCTTCAGTGGCTTTGGGGAGGTGCTGTTCC
GGGAGAGCGTGCCCATGCACACCTGTGCCCGCTACCTGTTCACCGCACTGCTGCCTCATGACCCGGACCT
GGCCTATCGCCTCGCGCTGCGAGCTATGAGGCTGCCCATACTGGAGACAGCATTTCCTGCTGGAGAACCT
CATCCCAGCCCGCTGGACTCCATCATGAGCAACCGCTTCCCCCGCTGGTTCATCCTTGGCCACCTGGAGA
CCCGCCAGTGTGAACTGGCTTCCACCATGTTGACGGCCGCCAAGGGAGACCCCAAGTGGCTGCACACGGT
ACTGGGCTCCATCCAGCAGAACATCCACTCTCCGGCCCTGCTCTTTAAGCTGGCGCAGGACGCCTGCAAG
ACAGCCACCCCGGTCAGCGCCCCACCAGACACCACGCTGCTGGGCATCGCACTGGAGCTGGGGCTGCAGG
TGATGCGGATGACTCTGAACGTAATGACCTGGCGGCGGAGGGAGATGGTGCGCTGGCTGGTCAGCTGTGC
CACAGAGATTGGCCCGCAAGCCCTGATGAATATCATGCAGAACTGGTATTCCTTATTCACACCAGTGGAG
GCGGCTACCATCGTGGCAGTGACGGGCACCACACACGCCACTCTGCTGCGACTGCAGCTGGACACATCGC
GGAGGGAGGAGCTCTGGGCCTGCGCCCGCACCCTGGCCTTGCAGTGCGCGATGAAGGACCCTCAGAACTG
CGCCTTGCCTGCCCTGACCCTGTGCGAGAAGAACCACTCGGCCTTCGAGGCGGCCTACCAGATCGTGCTG
GACGCGGCGGCCGGCGGCCTGGGCCACGCCCACCTCTTCACTGTGGCCCGCTATATGGAGCACCGCGGGC
TGCCGCTCCGGGCCTACAAGCTGGCGACGCTGGCCCTGGCGCAGCTCAGCATCGCCTTCAACCAGGACAG
CCACCCTGCCGTCAACGACGTGCTTTGGGCCTGCTCTCTCAGCCACTCCCTGGGCCGGCACGAGCTCTCT
GCCATCGTCCCCCTCATCATTCGCAGCATCCACTGTGCCCCAATGCTGTCCGATATTCTGCGCCGCTGGA
CTCTCTCGGCGCCCGGTCTGGGCCCCTTAGGGGCACGCCGGGCCGCCAAGCCACTGGGTGCCGACCGGGC
GCCGCTCTGCCAGCTCCTGGACGCGGCAGTCACCGCCTACATCACCACCAGCCACTCGCGCCTCACGCAC
ATCAGCCCGCGGCACTATGGGGATTTCATCGAATTCCTGGGCAAGGCCCGGGAGACCTTCCTGCTGGCGC
CCGACGGGCACCTCCAGTTCTCACAGTTCTTGGAGAACCTCAAACAGACCTACAAGGGCAAGAAGAAACT
CATGCTTTTGGTGCGGGAGCGTTTTGGTTGA

Translation (1106 aa):
MEPPAAKRSRGCPAGPEERDAGAGAARGRGRPEALLDLSAKRVAESWAFEQVEERFSRVPEPVQKRIVFW
SFPRSEREICMYSSLGYPPPEGEHDARVPFTRGLHLLQSGAVDRVLQVGFHLSGNIREPGSPGEPERLYH
VSISFDRCKITSVSCGCDNRDLFYCAHVVALSLYRIRHAHQVELRLPISETLSQMNRDQLQKFVQYLISA
HHTEVLPTAQRLADEILLLGSEINLVNGAPDPTAGAGIEDANCWHLDEEQIQEQVKQLLSNGGYYGASQQ
LRSMFSKVREMLRMRDSNGARMLILMTEQFLQDTRLALWRQQGAGMTDKCRQLWDELGALWVCVVLSPHC
KPEERAGWLQLLSRWDKLDVCPLEEGNYSFDGPSLQPTMAPAPGSEEEEEVAATSPRHTVFGRALLAGEL
HWNDAYLQRILASDSYGPSLTGSVGGDKPTFDPQGRPLWLGEPFPTACARVDTLRAHGYPRQALRLASAI
INTLRLQQRHQLESYKQQKKELLQKGSTCITNTEGWVGHPLDPIGCLCRALLEACRLEEETLTLYPDSGP
EKRKVAYQHVPVPGSPGESYLVLALEVALLGLGQQRALPEGLYAQDKVVRNEEQLLALLEEVELDERLVQ
VLRKQAGLLLEGGPFSGFGEVLFRESVPMHTCARYLFTALLPHDPDLAYRLALRAMRLPILETAFPAGEP
HPSPLDSIMSNRFPRWFILGHLETRQCELASTMLTAAKGDPKWLHTVLGSIQQNIHSPALLFKLAQDACK
TATPVSAPPDTTLLGIALELGLQVMRMTLNVMTWRRREMVRWLVSCATEIGPQALMNIMQNWYSLFTPVE
AATIVAVTGTTHATLLRLQLDTSRREELWACARTLALQCAMKDPQNCALPALTLCEKNHSAFEAAYQIVL
DAAAGGLGHAHLFTVARYMEHRGLPLRAYKLATLALAQLSIAFNQDSHPAVNDVLWACSLSHSLGRHELS
AIVPLIIRSIHCAPMLSDILRRWTLSAPGLGPLGARRAAKPLGADRAPLCQLLDAAVTAYITTSHSRLTH
ISPRHYGDFIEFLGKARETFLLAPDGHLQFSQFLENLKQTYKGKKKLMLLVRERFG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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