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Report for CCDS92816.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92816.1 Public Homo sapiens 2 C2orf92 24 110 108 CCDS HistoryNCBI Gene:728537Re-query CCDS DB by CCDS ID:92816.1Re-query CCDS DB by GeneID:728537See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92816.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000599501.6 ENSP00000490827.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000599501.6Link to Ensembl Protein Viewer:ENSP00000490827.1Re-query CCDS DB by Nucleotide ID:ENST00000599501Re-query CCDS DB by Protein ID:ENSP00000490827
Current member NCBI NM_001410919.1 NP_001397848.1 Accepted alive Link to Nucleotide Sequence:NM_001410919.1Link to Protein Sequence:NP_001397848.1Re-query CCDS DB by Nucleotide ID:NM_001410919Re-query CCDS DB by Protein ID:NP_001397848Link to BLAST:NP_001397848.1

Chromosomal Locations for CCDS 92816.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 97669789 97669834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 97675845 97675928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 97688895 97688993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 97690256 97690327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 97699026 97699136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 97701154 97701304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 97702669 97702801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (696 nt):
ATGAGCAGAGCCATGGCCCTCTTCTTTGTTCTCTGCTGGATCCAAGGCTATTCCCAACAGAAGAGCTTGA
ACAATGCTGCATTTGCATCAGGTTCAAATGAGCGAGAGGAACATTTGGCTAAAATATTTGATGAAATTCT
ACTGCAGGTGTTTCCAAAGTTTCCGTATGACCCATCATTTAACGAAGCAACAGCAGTCAGATCCATTACA
AAGACAGACATGAGAAAAGGAACCAGCATTGCTTGGAATTCTCCTAAACCAGAATATTTCCTTGGCAGTG
TGGACAAAATTCCTGATAAAGATCACCTTTCAGAGGAGAAGAATTTTAAAGAATCCTGTCTGTTCGACAG
GGATTTAAGAGAGCAGTTAACTACTATAGATAAAGAAACACTTCAAGGAGCAGCTAAACCAGATGCTCAC
TTTAGGACTATGCCCTGCGGGCAGCTTCTGCACTTCCTGCAGAGGAACACCATCATCGCCGCCGTCTCAG
GGGTGGCCATCCTCATGGCCATCGTGCTGTTGCTGCTTGGGTTGGCCTCATACATCAGGAAGAAACAGCC
ATCATCTCCTCTGGCAAACACGACATATAATATTTTTATAATGGATGGAAAGACATGGTGGCACAATTCT
GAAGAAAAAAATTTCACAAAACTTGCAAAAAAACAGAAACAGTTGAAGAGCAGCTCCTGTGTCTAA

Translation (231 aa):
MSRAMALFFVLCWIQGYSQQKSLNNAAFASGSNEREEHLAKIFDEILLQVFPKFPYDPSFNEATAVRSIT
KTDMRKGTSIAWNSPKPEYFLGSVDKIPDKDHLSEEKNFKESCLFDRDLREQLTTIDKETLQGAAKPDAH
FRTMPCGQLLHFLQRNTIIAAVSGVAILMAIVLLLLGLASYIRKKQPSSPLANTTYNIFIMDGKTWWHNS
EEKNFTKLAKKQKQLKSSSCV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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