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Report for CCDS92880.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92880.1 Public Homo sapiens 2 ARL6IP6 24 110 108 CCDS HistoryNCBI Gene:151188Re-query CCDS DB by CCDS ID:92880.1Re-query CCDS DB by GeneID:151188See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92880.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000686080.1 ENSP00000509648.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000686080.1Link to Ensembl Protein Viewer:ENSP00000509648.1Re-query CCDS DB by Nucleotide ID:ENST00000686080Re-query CCDS DB by Protein ID:ENSP00000509648
Original member Current member NCBI NM_001371972.1 NP_001358901.1 Accepted alive Link to Nucleotide Sequence:NM_001371972.1Link to Protein Sequence:NP_001358901.1Re-query CCDS DB by Nucleotide ID:NM_001371972Re-query CCDS DB by Protein ID:NP_001358901Link to BLAST:NP_001358901.1

Chromosomal Locations for CCDS 92880.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 152718625 152719024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 152720533 152720586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 152735087 152735126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 152759747 152759840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (588 nt):
ATGTCGTTTGCTGAGAGCGGGTGGCGGTCGGCTCTGCGGCGCCGCGGTCCCGGCACCCCGGGCCCTGTGG
CTCGGCCATCGTATTCCTCCTTTACTCAGGGGGACAGCTGGGGTGAAGGCGAAGTCGACGAGGAGGAGGG
ATGCGACCAAGTGGCCCGCGACCTGCGGGCGGAGTTCTCGGCTGGGGCGTGGTCAGAGCCCAGAAAGCGC
TCGGTGCTCCCGCCGGACGGGAACGGGTCGCCCGTTCTGCCCGATAAGCGCAATGGTATCTTTCCCGCGG
CCGCGGGCAGCAGAGCCCAGCCTCGGCGGTGGCCGGTCCAGGTCCTCTCTATTCTCTGCTCGCTGCTCTT
CGCCATTCTTCTCGCCTTCCTCCTCGCCATCGCCTACTTGATCGTTAAAGAGTTGCATGCTGAGAATTTG
AAAAATGAAGATGATGTAGACACTGGACTATTAGGAATGTTTCCTCCTACTCCTCTTTCACCTGCCAGGT
TCAAGAAACTGACTGGACATTCTTTCCACATGGGCTATAGCATGGCGATTTTGAATGGCATCGTAGCTGC
TCTTACTGTAGCATGGTGCCTCATGTAA

Translation (195 aa):
MSFAESGWRSALRRRGPGTPGPVARPSYSSFTQGDSWGEGEVDEEEGCDQVARDLRAEFSAGAWSEPRKR
SVLPPDGNGSPVLPDKRNGIFPAAAGSRAQPRRWPVQVLSILCSLLFAILLAFLLAIAYLIVKELHAENL
KNEDDVDTGLLGMFPPTPLSPARFKKLTGHSFHMGYSMAILNGIVAALTVAWCLM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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