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Report for CCDS93190.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93190.1 Public Homo sapiens 22 CIMAP1B 24 110 108 CCDS HistoryNCBI Gene:440836Re-query CCDS DB by CCDS ID:93190.1Re-query CCDS DB by GeneID:440836See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93190.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000428989.3 ENSP00000390712.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000428989.3Link to Ensembl Protein Viewer:ENSP00000390712.3Re-query CCDS DB by Nucleotide ID:ENST00000428989Re-query CCDS DB by Protein ID:ENSP00000390712
Original member Current member NCBI NM_001382808.1 NP_001369737.1 Accepted alive Link to Nucleotide Sequence:NM_001382808.1Link to Protein Sequence:NP_001369737.1Re-query CCDS DB by Nucleotide ID:NM_001382808Re-query CCDS DB by Protein ID:NP_001369737Link to BLAST:NP_001369737.1

Chromosomal Locations for CCDS 93190.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 50530480 50530560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50530688 50530852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50530937 50531058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50531191 50531295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50531570 50531773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50531969 50532077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (786 nt):
ATGGGCTCGGACGCCTGGGTGGGCCTTTGGCGGCCACACCGGCCCCGCGGCCCCATCGCGGCGCACTACG
GAGGCCCCGGGCCCAAATACAAGCTGCCGCCCAACACCGGCTACGCCCTGCATGACCCGTCGCGGCCGCG
CGCCCCCGCCTTCACCTTCGGCGCGCGCTTCCCCACGCAGCAGACGACGTGCGGCCCCGGGCCAGGCCAC
CTGGTGCCCGCTCGCATGACCGTGCGCGGCACCGACGGCGCCCCCGCCTACTCCATCTACGGCCGCCCAC
GCCGCTCAGCGCCCTTCCTCACTCCGGGACCTGGCAGGTACTTCCCGGAGCGAGCGGGGAACGCGACGTA
CCCCAGTGCGCCTCGGCACACCATTGCTCCCCGAAACTGGGGTGTCCAGGCGGAACAGCAGAGCCCAGGT
CCCGCGGCCTATACGGTGCCCTCGCTCTTGGGTCCGCGCGTCATCGGCAAAGTCTCCGCCCCAACTTGCT
CCATCTACGGCCGCAGAGCGGCTGGCAGTTTCTTCGAGGACCTCAGCAAGACCCCGGGCCCCTGCGCCTA
TCAGGTCGTGAGTCCAGGGGTCTACAAGTCCCGGGCCCCCCAGTTCACGATTCTGGCGCGGACTTCGCTC
CCCCAAGACAACACTCGGAAGCCAGGGCCCGCGGCCTACAACGTGGATCAGGTGGCCTGGAGCCCAGGGT
CAAGGCACCGGAAGCCCCGCGGCTGGAGTTTCGGGATCCGGCACTCGGACTACCTGGCCCCGCTGGTGAC
CGACGCGGACAACTGA

Translation (261 aa):
MGSDAWVGLWRPHRPRGPIAAHYGGPGPKYKLPPNTGYALHDPSRPRAPAFTFGARFPTQQTTCGPGPGH
LVPARMTVRGTDGAPAYSIYGRPRRSAPFLTPGPGRYFPERAGNATYPSAPRHTIAPRNWGVQAEQQSPG
PAAYTVPSLLGPRVIGKVSAPTCSIYGRRAAGSFFEDLSKTPGPCAYQVVSPGVYKSRAPQFTILARTSL
PQDNTRKPGPAAYNVDQVAWSPGSRHRKPRGWSFGIRHSDYLAPLVTDADN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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