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Report for CCDS93992.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93992.1 Public Homo sapiens 6 KPNA5 24 110 108 CCDS HistoryNCBI Gene:3841Re-query CCDS DB by CCDS ID:93992.1Re-query CCDS DB by GeneID:3841See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93992.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000697697.1 ENSP00000513404.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000697697.1Link to Ensembl Protein Viewer:ENSP00000513404.1Re-query CCDS DB by Nucleotide ID:ENST00000697697Re-query CCDS DB by Protein ID:ENSP00000513404
Original member Current member NCBI NM_001366304.1 NP_001353233.1 Accepted alive Link to Nucleotide Sequence:NM_001366304.1Link to Protein Sequence:NP_001353233.1Re-query CCDS DB by Nucleotide ID:NM_001366304Re-query CCDS DB by Protein ID:NP_001353233Link to BLAST:NP_001353233.1
Original member Current member NCBI NM_001366305.2 NP_001353234.1 Accepted alive Link to Nucleotide Sequence:NM_001366305.2Link to Protein Sequence:NP_001353234.1Re-query CCDS DB by Nucleotide ID:NM_001366305Re-query CCDS DB by Protein ID:NP_001353234Link to BLAST:NP_001353234.1

Chromosomal Locations for CCDS 93992.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 116681335 116681338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 116681493 116681552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 116689320 116689453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 116692055 116692156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 116692293 116692392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 116698704 116698798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 116702019 116702150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 116705072 116705160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 116716219 116716318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 116722126 116722289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 116724297 116724375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 116725751 116725876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 116726495 116726622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 116729563 116729741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 116732136 116732323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1680 nt):
ATGGGGCGACAGCGGTCGCGGGGGCGTGGCAGCCGGACCTTTCCCTTGCGGACGCGAAGGCGTGATGCCA
TGGCTAGTCCAGGGAAAGATAACTATAGAATGAAAAGTTATAAGAATAAAGCCCTAAATCCTCAAGAGAT
GCGTAGACGAAGAGAAGAAGAAGGAATACAGCTTAGAAAACAAAAAAGAGAAGAACAGTTGTTCAAACGC
AGAAATGTCTATTTGCCCAGAAATGATGAATCTATGCTTGAAAGTCCTATACAGGATCCAGATATTAGTT
CCACTGTACCCATTCCAGAGGAAGAAGTTGTTACTACAGATATGGTTCAGATGATTTTTTCTAATAATGC
TGATCAACAGCTAACAGCAACACAGAAATTTAGAAAGCTGCTTTCTAAAGAACCTAATCCACCAATAGAT
CAAGTTATACAGAAACCAGGAGTTGTACAGAGATTTGTGAAATTTCTTGAAAGAAATGAAAATTGCACTT
TACAATTTGAAGCTGCATGGGCATTAACAAATATAGCATCTGGAACTTTTCTGCATACCAAGGTAGTGAT
TGAAACTGGGGCTGTTCCGATTTTTATCAAACTTCTTAATTCTGAACATGAAGATGTTCAGGAACAGGCT
GTTTGGGCACTTGGTAATATTGCTGGTGACAATGCAGAATGCAGAGATTTTGTTTTGAATTGTGAAATAC
TTCCACCTCTTTTAGAGTTATTAACAAATTCAAACAGACTCACAACAACAAGAAATGCCGTGTGGGCCCT
CTCAAATTTATGTAGAGGCAAAAACCCTCCTCCAAACTTTAGTAAGGTTTCACCTTGCTTAAATGTCCTG
TCACGACTGTTGTTTAGCAGTGACCCAGATGTGTTAGCAGACGTGTGTTGGGCCCTTTCTTATCTCTCCG
ATGGACCCAATGATAAAATTCAAGCAGTCATTGATTCTGGAGTCTGTCGAAGATTGGTGGAACTTTTGAT
GCACAATGATTATAAAGTTGTATCACCTGCATTAAGGGCAGTTGGTAATATTGTGACTGGTGATGATATT
CAAACACAGGTAATTTTGAATTGTTCTGCATTACCCTGTCTCTTACATTTATTGAGTAGCCCAAAGGAGT
CAATTAGAAAAGAAGCCTGCTGGACTGTTTCTAACATCACTGCTGGAAATAGAGCTCAGATTCAGGCTGT
TATAGATGCAAATATTTTTCCTGTTTTGATTGAGATTCTTCAGAAAGCAGAGTTTCGTACCAGAAAAGAA
GCAGCTTGGGCTATAACTAATGCAACATCAGGAGGTACTCCAGAGCAAATAAGGTATTTGGTAGCTTTAG
GCTGCATTAAACCACTTTGTGATCTTTTGACTGTTATGGACTCCAAAATAGTCCAAGTGGCTTTAAATGG
ACTTGAAAATATTTTACGTCTTGGAGAACAAGAATCTAAGCAGAATGGAATAGGCATTAATCCATACTGT
GCTCTCATTGAAGAAGCATATGGTCTGGATAAAATTGAGTTTTTGCAAAGCCATGAAAATCAGGAAATTT
ACCAGAAGGCATTTGATCTGATTGAACATTACTTTGGTGTAGAAGAAGATGACCCCAGCATTGTACCTCA
GGTGGATGAAAACCAACAACAGTTTATATTTCAGCAGCAGGAAGCACCAATGGATGGATTTCAACTTTAA

Translation (559 aa):
MGRQRSRGRGSRTFPLRTRRRDAMASPGKDNYRMKSYKNKALNPQEMRRRREEEGIQLRKQKREEQLFKR
RNVYLPRNDESMLESPIQDPDISSTVPIPEEEVVTTDMVQMIFSNNADQQLTATQKFRKLLSKEPNPPID
QVIQKPGVVQRFVKFLERNENCTLQFEAAWALTNIASGTFLHTKVVIETGAVPIFIKLLNSEHEDVQEQA
VWALGNIAGDNAECRDFVLNCEILPPLLELLTNSNRLTTTRNAVWALSNLCRGKNPPPNFSKVSPCLNVL
SRLLFSSDPDVLADVCWALSYLSDGPNDKIQAVIDSGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDI
QTQVILNCSALPCLLHLLSSPKESIRKEACWTVSNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKE
AAWAITNATSGGTPEQIRYLVALGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQESKQNGIGINPYC
ALIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGVEEDDPSIVPQVDENQQQFIFQQQEAPMDGFQL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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