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Report for CCDS94018.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94018.1 Public Homo sapiens 6 LRP11 24 110 108 CCDS HistoryNCBI Gene:84918Re-query CCDS DB by CCDS ID:94018.1Re-query CCDS DB by GeneID:84918See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94018.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367368.3 ENSP00000356338.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000367368.3Link to Ensembl Protein Viewer:ENSP00000356338.2Re-query CCDS DB by Nucleotide ID:ENST00000367368Re-query CCDS DB by Protein ID:ENSP00000356338
Current member NCBI NM_001410946.1 NP_001397875.1 Accepted alive Link to Nucleotide Sequence:NM_001410946.1Link to Protein Sequence:NP_001397875.1Re-query CCDS DB by Nucleotide ID:NM_001410946Re-query CCDS DB by Protein ID:NP_001397875Link to BLAST:NP_001397875.1

Chromosomal Locations for CCDS 94018.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 149842612 149842676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 149842983 149843124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 149853003 149853160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 149863408 149864020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (978 nt):
ATGGCCTCCGTCGCCCAGGAGAGCGCGGGCTCGCAGCGCCGGCTACCGCCGCGTCACGGGGCGCTGCGCG
GGCTGCTACTGCTCTGCCTGTGGCTGCCAAGCGGCCGTGCGGCCTTGCCGCCCGCGGCGCCGCTGTCCGA
ACTGCACGCGCAGCTGTCGGGCGTGGAGCAGCTGCTGGAGGAGTTCCGCCGGCAACTGCAGCAGGAGCGG
CCTCAGGAGGAGCTGGAGCTGGAGCTGCGCGCGGGCGGCGGCCCCCAGGAGGACTGCCCGGGCCCGGGCA
GCGGCGGCTACAGCGCAATGCCTGACGCCATCATCCGCACCAAGGACTCCCTGGCGGCGGGTGCCAGCTT
CCTGCGGGCGCCGGCGGCCGTGCGGGGCTGGCGGCAATGCGTGGCGGCCTGCTGCTCCGAGCCGCGCTGC
TCCGTGGCCGTGGTGGAGCTGCCCCGGCGCCCCGCGCCCCCGGCAGCCGTGCTCGGCTGCTACCTCTTCA
ACTGCACGGCGCGCGGCCGCAACGTCTGCAAGTTCGCGCTGCACAGCGGCTACAGCAGCTACAGCCTCAG
CCGCGCGCCGGACGGCGCCGCCCTGGCCACCGCGCGCGCCTCGCCCCGGCAGGAAAAGGATGCGCCTCCA
CTTAGCAAGGCTGGGCAGGATGTGGTTCTGCATCTGCCCACAGACGGGGTGGTTCTAGACGGCCGCGAGA
GCACAGATGACCACGCCATCGTCCAGTATGAGTGGGCACTGCTGCAGGGGGACCCGTCAGTGGACATGAA
GGTGCCTCAATCAGGAACCCTGAAGCTGTCCCACCTACAGGAGGGAACCTACACCTTCCAGCTGACCGTG
ACGGACACTGCCGGGCAGAGAAGCTCTGACAACGTGTCAGTGACAGTGCTTCGCGCAGCCTACTCCACAG
GAGATGGATGGTCCATTTGCTGCATCTGTTCCAAGAGGGAAGCTAAGGAGTTTAGTGAAACCAGTTGA

Translation (325 aa):
MASVAQESAGSQRRLPPRHGALRGLLLLCLWLPSGRAALPPAAPLSELHAQLSGVEQLLEEFRRQLQQER
PQEELELELRAGGGPQEDCPGPGSGGYSAMPDAIIRTKDSLAAGASFLRAPAAVRGWRQCVAACCSEPRC
SVAVVELPRRPAPPAAVLGCYLFNCTARGRNVCKFALHSGYSSYSLSRAPDGAALATARASPRQEKDAPP
LSKAGQDVVLHLPTDGVVLDGRESTDDHAIVQYEWALLQGDPSVDMKVPQSGTLKLSHLQEGTYTFQLTV
TDTAGQRSSDNVSVTVLRAAYSTGDGWSICCICSKREAKEFSETS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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