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Report for CCDS94281.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94281.1 Public Homo sapiens 8 PLPP5 24 110 108 CCDS HistoryNCBI Gene:84513Re-query CCDS DB by CCDS ID:94281.1Re-query CCDS DB by GeneID:84513See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94281.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000529359.5 ENSP00000434916.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000529359.5Link to Ensembl Protein Viewer:ENSP00000434916.1Re-query CCDS DB by Nucleotide ID:ENST00000529359Re-query CCDS DB by Protein ID:ENSP00000434916
Current member NCBI NM_001410920.1 NP_001397849.1 Accepted alive Link to Nucleotide Sequence:NM_001410920.1Link to Protein Sequence:NP_001397849.1Re-query CCDS DB by Nucleotide ID:NM_001410920Re-query CCDS DB by Protein ID:NP_001397849Link to BLAST:NP_001397849.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001397849.1 223 Q8NEB5-3 223 100% 0 0

Chromosomal Locations for CCDS 94281.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 38264444 38264604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38266141 38266311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38267267 38267391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38267897 38267960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38268371 38268461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38268882 38268941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (672 nt):
ATGTGGCTCTACCGGAACCCCTACGTGGAGGCGGAGTATTTCCCCACCAAGCCGATGTTTGTTATTGCAT
TTCTCTCTCCACTGTCTCTGATCTTCCTGGCCAAATTTCTCAAGAAGGCAGACACAAGAGACAGCAGACA
AGCCTGCCTGGCTGCCAGCCTTGCCCTGGCTCTGAATGGCGTCTTTACCAACACAATAAAACTGATCGTA
GGGAGGCCACGCCCAGATTTCTTCTACCGCTGCTTCCCTGATGGGCTAGCCCATTCTGACTTGATGTGTA
CAGGGGATAAGGACGTGGTGAATGAGGGCCGAAAGAGCTTCCCCAGTGGACATTCTTCCTTTGCATTTGC
TGGTCTGGCCTTTGCGTCCTTCTACCTGGCAGGGAAGTTACACTGCTTCACACCACAAGGCCGTGGGAAA
TCTTGGAGGTTCTGTGCCTTTCTGTCACCTCTACTTTTTGCAGCTGTGATTGCACTGTCCCGCACATGTG
ACTACAAGCATCACTGGCAAGATGTACTAGTTGGATCCATGATTGGAATGACATTTGCCTATGTCTGCTA
TCGGCAGTATTATCCTCCTCTGACTGATGCAGAATGCCATAAACCATTTCAAGACAAACTTGTACTTTCC
ACTGCACAGAAGCCTGGGGATTCTTATTGTTTTGATATTTAA

Translation (223 aa):
MWLYRNPYVEAEYFPTKPMFVIAFLSPLSLIFLAKFLKKADTRDSRQACLAASLALALNGVFTNTIKLIV
GRPRPDFFYRCFPDGLAHSDLMCTGDKDVVNEGRKSFPSGHSSFAFAGLAFASFYLAGKLHCFTPQGRGK
SWRFCAFLSPLLFAAVIALSRTCDYKHHWQDVLVGSMIGMTFAYVCYRQYYPPLTDAECHKPFQDKLVLS
TAQKPGDSYCFDI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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