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Report for CCDS9492.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9492.1 Public Homo sapiens 13 GPR183 24 110 108 CCDS HistoryNCBI Gene:1880Re-query CCDS DB by CCDS ID:9492.1Re-query CCDS DB by GeneID:1880See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9492.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000376414.5 ENSP00000365596.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000376414.5Link to Ensembl Protein Viewer:ENSP00000365596.4Re-query CCDS DB by Nucleotide ID:ENST00000376414Re-query CCDS DB by Protein ID:ENSP00000365596
Original member Current member NCBI NM_004951.5 NP_004942.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004951.5Link to Protein Sequence:NP_004942.1Re-query CCDS DB by Nucleotide ID:NM_004951Re-query CCDS DB by Protein ID:NP_004942Link to BLAST:NP_004942.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004942.1 361 P32249 361 100% 0 0

Chromosomal Locations for CCDS 9492.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 99295060 99296145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1086 nt):
ATGGATATACAAATGGCAAACAATTTTACTCCGCCCTCTGCAACTCCTCAGGGAAATGACTGTGACCTCT
ATGCACATCACAGCACGGCCAGGATAGTAATGCCTCTGCATTACAGCCTCGTCTTCATCATTGGGCTCGT
GGGAAACTTACTAGCCTTGGTCGTCATTGTTCAAAACAGGAAAAAAATCAACTCTACCACCCTCTATTCA
ACAAATTTGGTGATTTCTGATATACTTTTTACCACCGCTTTGCCTACACGAATAGCCTACTATGCAATGG
GCTTTGACTGGAGAATCGGAGATGCCTTGTGTAGGATAACTGCGCTAGTGTTTTACATCAACACATATGC
AGGTGTGAACTTTATGACCTGCCTGAGTATTGACCGCTTCATTGCTGTGGTGCACCCTCTACGCTACAAC
AAGATAAAAAGGATTGAACATGCAAAAGGCGTGTGCATATTTGTCTGGATTCTAGTATTTGCTCAGACAC
TCCCACTCCTCATCAACCCTATGTCAAAGCAGGAGGCTGAAAGGATTACATGCATGGAGTATCCAAACTT
TGAAGAAACTAAATCTCTTCCCTGGATTCTGCTTGGGGCATGTTTCATAGGATATGTACTTCCACTTATA
ATCATTCTCATCTGCTATTCTCAGATCTGCTGCAAACTCTTCAGAACTGCCAAACAAAACCCACTCACTG
AGAAATCTGGTGTAAACAAAAAGGCTCTCAACACAATTATTCTTATTATTGTTGTGTTTGTTCTCTGTTT
CACACCTTACCATGTTGCAATTATTCAACATATGATTAAGAAGCTTCGTTTCTCTAATTTCCTGGAATGT
AGCCAAAGACATTCGTTCCAGATTTCTCTGCACTTTACAGTATGCCTGATGAACTTCAATTGCTGCATGG
ACCCTTTTATCTACTTCTTTGCATGTAAAGGGTATAAGAGAAAGGTTATGAGGATGCTGAAACGGCAAGT
CAGTGTATCGATTTCTAGTGCTGTGAAGTCAGCCCCTGAAGAAAATTCACGTGAAATGACAGAAACGCAG
ATGATGATACATTCCAAGTCTTCAAATGGAAAGTGA

Translation (361 aa):
MDIQMANNFTPPSATPQGNDCDLYAHHSTARIVMPLHYSLVFIIGLVGNLLALVVIVQNRKKINSTTLYS
TNLVISDILFTTALPTRIAYYAMGFDWRIGDALCRITALVFYINTYAGVNFMTCLSIDRFIAVVHPLRYN
KIKRIEHAKGVCIFVWILVFAQTLPLLINPMSKQEAERITCMEYPNFEETKSLPWILLGACFIGYVLPLI
IILICYSQICCKLFRTAKQNPLTEKSGVNKKALNTIILIIVVFVLCFTPYHVAIIQHMIKKLRFSNFLEC
SQRHSFQISLHFTVCLMNFNCCMDPFIYFFACKGYKRKVMRMLKRQVSVSISSAVKSAPEENSREMTETQ
MMIHSKSSNGK


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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