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Report for CCDS9575.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9575.1 Public Homo sapiens 14 MRPL52 24 110 108 CCDS HistoryNCBI Gene:122704Re-query CCDS DB by CCDS ID:9575.1Re-query CCDS DB by GeneID:122704See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9575.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000397496.7 ENSP00000380633.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000397496.7Link to Ensembl Protein Viewer:ENSP00000380633.3Re-query CCDS DB by Nucleotide ID:ENST00000397496Re-query CCDS DB by Protein ID:ENSP00000380633
Original member Current member NCBI NM_180982.3 NP_851313.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_180982.3Link to Protein Sequence:NP_851313.1Re-query CCDS DB by Nucleotide ID:NM_180982Re-query CCDS DB by Protein ID:NP_851313Link to BLAST:NP_851313.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_851313.1 122 Q86TS9-3 122 100% 0 0

Chromosomal Locations for CCDS 9575.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 22829913 22829940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22830053 22830110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22830187 22830254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22833418 22833482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22834172 22834321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (369 nt):
ATGGCTGCTTTAGGGACTGTTCTCTTCAGTGTCCGGAGGCTGCACTGCAGCGTAGCCGCTTGGGCGGGCG
GCCAGTGGCGACTACAGCAGGGACTGGCTGCCAACCCCTCCGGCTACGGGCCCCTTACCGAGCTCCCAGA
CTGGTCATATGCGGATGGCCGCCCTGCTCCCCCAATGAAAGGCCAGCTTCGAAGAAAAGCTGAAAGGGAG
ACGTTTGCAAGACGAGTTGTACTGCTGTCACAGGAAATGGACGCTGGATTACAAGCATGGCAGCTCAGGC
AGCAGAAGTTGCAGGAAGAACAAAGGAAGCAGGAAAATGCTCTTAAACCCAAAGGGGCTTCACTGAAGAG
CCCACTTCCAAGTCAATAA

Translation (122 aa):
MAALGTVLFSVRRLHCSVAAWAGGQWRLQQGLAANPSGYGPLTELPDWSYADGRPAPPMKGQLRRKAERE
TFARRVVLLSQEMDAGLQAWQLRQQKLQEEQRKQENALKPKGASLKSPLPSQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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