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Report for CCDS9582.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9582.1 Public Homo sapiens 14 AJUBA 24 110 108 CCDS HistoryNCBI Gene:84962Re-query CCDS DB by CCDS ID:9582.1Re-query CCDS DB by GeneID:84962See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9582.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000397388.7 ENSP00000380543.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397388.7Link to Ensembl Protein Viewer:ENSP00000380543.3Re-query CCDS DB by Nucleotide ID:ENST00000397388Re-query CCDS DB by Protein ID:ENSP00000380543
Original member Current member NCBI NM_198086.3 NP_932352.1 Accepted alive Link to Nucleotide Sequence:NM_198086.3Link to Protein Sequence:NP_932352.1Re-query CCDS DB by Nucleotide ID:NM_198086Re-query CCDS DB by Protein ID:NP_932352Link to BLAST:NP_932352.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_932352.1 121 Q96IF1-2 121 100% 0 0

Chromosomal Locations for CCDS 9582.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 22973443 22973568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22974047 22974115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22974839 22974890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22974974 22975092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (366 nt):
ATGGGGAAGTCCTATCATCCAGGCTGTTTCCGATGCATTGTTTGCAACAAGTGCCTGGATGGCATCCCCT
TCACAGTGGACTTCTCCAACCAAGTATACTGTGTCACCGACTACCACAAAAATTATGCTCCTAAGTGTGC
AGCCTGTGGCCAACCCATCCTCCCCTCTGAGGGCTGTGAGGACATCGTGAGGGTGATATCCATGGACCGG
GATTATCACTTTGAGTGCTACCACTGTGAGGACTGCCGGATGCAGCTGAGTGATGAGGAAGGCTGCTGCT
GTTTCCCTCTGGATGGGCACTTGCTCTGCCATGGTTGCCACATGCAGCGGCTCAATGCCCGACAACCCCC
TGCCAACTATATCTGA

Translation (121 aa):
MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCEDIVRVISMDR
DYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCHMQRLNARQPPANYI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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