NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS9677.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9677.1 Public Homo sapiens 14 FBXO33 24 110 108 CCDS HistoryNCBI Gene:254170Re-query CCDS DB by CCDS ID:9677.1Re-query CCDS DB by GeneID:254170See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9677.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000298097.8 ENSP00000298097.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000298097.8Link to Ensembl Protein Viewer:ENSP00000298097.7Re-query CCDS DB by Nucleotide ID:ENST00000298097Re-query CCDS DB by Protein ID:ENSP00000298097
Original member Current member NCBI NM_203301.4 NP_976046.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_203301.4Link to Protein Sequence:NP_976046.1Re-query CCDS DB by Nucleotide ID:NM_203301Re-query CCDS DB by Protein ID:NP_976046Link to BLAST:NP_976046.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_976046.1 555 Q7Z6M2 555 100% 0 0

Chromosomal Locations for CCDS 9677.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 39399516 39399787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39401176 39401861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39402401 39402511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39431564 39432162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1668 nt):
ATGTTGTTGTTCTTGTCAGTGCCGCAGCCCCGACCGCCGGGAGCTCGAACCCGAGCCGGGGCCGCCCGGG
TGGCGCGGTGGCGGCGGCTGCGGCTGCAGCAGCTGCGACGGCTGCGGGGGCTGCTCCGGGTACTGCGGGG
GCGGCCGGGAGCCGGCAGCCGGCGGCGGGGCCGGATGGCTCTGTGCGGGCAGGCGGCGGGCGCTGCGTCG
CTGCCCAGCGAGCTGATCGTGCACATCTTCTCTTTTCTGCCGGCGCCCGACCGGCTGCGGGCCTCGGCCT
CCTGCTCGCACTGGCGTGAGTGCCTCTTCTATCCGGCCCTGTGGCCCCAGCTCCGCATCTGCCTCCGCGT
CTCGCCCGCGGAGCAGCCTCGGCTGGAATTCCTCATGCGCAAGTGCGGCTGGTTCGTGCGAGAGCTGCGT
GTTGAATTCGCCGCCGAGAACTATCTGAGCGGCGGTGGCCCAGGGGACGGAGGTGGCGCGGACACCGGGA
CTGGAGGGGAGGAAGTCGAGGCCCTGCAGCTCTCAGCTCGTTGGCTGGAAGTGCTGCGCACCTACTTGGA
GCTGGTGCTTTGCGTGCTGGTCAGCATCCGGAACAACAGGAACCTTCAGAAGTTTAGTCTTTTTGGAGAC
ATAAGTGTTCTACAACAGCAAGGAAGTTTGTCAAATACATACCTCAGCAAGGTGGACCCTGATGGCAAAA
AAATTAAACAAATTCAGCAACTGTTTGAAGAAATCCTGAGTAATAGTAGGCAACTGAAATGGCTGTCCTG
TGGGTTTATGCTGGAAATAGTAACCCCAACATCACTGTCATCTCTCTCTAATGCTGTTGCCAACACCATG
GAGCACCTCAGTTTACTGGACAATAATATTCCTGGTAACAGCACTCTTATTACTGCAGTTGAACTGGAGC
GATTTGTGAATCTGCACTCACTTGCCTTGGATTTTTGTGACTTTACAGCTGAGATGGCAAGAGTCTTAAC
TGATAGCAACCATGTGCCTTTGCAACGACTGTCTCTTCTGGTTCACAATGTTTCTGTAATGCACAAGTCT
CTGGACAACATGCCAAATGATGAGCATTGGAAAGCCCTGTCACGAAAGAGCACCAGCTTTCGGGTCTATA
TAATGGCTTTTGATATCAAGAGTGAAGATATGTTAAAGATTCTGAAACCCAGTATACCACTAGAGAGGAT
TCATTTTGATAGCTATATCACTTGTGTTTCAGGGGCTATTGTTGATCTTATATCCAGGCAATATGACAAG
TTCCTCACTCATTTTATTTTAATGAATGATGTGATTGACACATCTGGTTTTCCAGATCTTAGTGACAACC
GAAATGAAGATCCGTTGGTTTTATTAGCATGGAGGTGCACAAAGCTCTCTCTTCTGGCAATTCATGGTTA
CACGGTGTGGGCACACAACCTCATTGCCATTGCTCGTCTTCGGGGCTCTGATCTGAAAGTGCTTGAAGTC
ACCGAAGAAAGCATTGATTTTGACCAAGGTGAACTGGCCGACCAGGATGTAGATCCAGTGCATAACCTTA
TTGAGCAGGTATCCCTGGGCCTGGGTCAACCTTGGCATGCAGTCATGGACATCGAATCACTCAGTGTCTT
CACTGAACCAAATCGTCATTTTTACAGAGAGATGCAAAGCTTCAGTGAAGACATTTAG

Translation (555 aa):
MLLFLSVPQPRPPGARTRAGAARVARWRRLRLQQLRRLRGLLRVLRGRPGAGSRRRGRMALCGQAAGAAS
LPSELIVHIFSFLPAPDRLRASASCSHWRECLFYPALWPQLRICLRVSPAEQPRLEFLMRKCGWFVRELR
VEFAAENYLSGGGPGDGGGADTGTGGEEVEALQLSARWLEVLRTYLELVLCVLVSIRNNRNLQKFSLFGD
ISVLQQQGSLSNTYLSKVDPDGKKIKQIQQLFEEILSNSRQLKWLSCGFMLEIVTPTSLSSLSNAVANTM
EHLSLLDNNIPGNSTLITAVELERFVNLHSLALDFCDFTAEMARVLTDSNHVPLQRLSLLVHNVSVMHKS
LDNMPNDEHWKALSRKSTSFRVYIMAFDIKSEDMLKILKPSIPLERIHFDSYITCVSGAIVDLISRQYDK
FLTHFILMNDVIDTSGFPDLSDNRNEDPLVLLAWRCTKLSLLAIHGYTVWAHNLIAIARLRGSDLKVLEV
TEESIDFDQGELADQDVDPVHNLIEQVSLGLGQPWHAVMDIESLSVFTEPNRHFYREMQSFSEDI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH