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Report for CCDS9923.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9923.1 Public Homo sapiens 14 SERPINA10 24 110 108 CCDS HistoryNCBI Gene:51156Re-query CCDS DB by CCDS ID:9923.1Re-query CCDS DB by GeneID:51156See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 9923.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261994.9 ENSP00000261994.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000261994.9Link to Ensembl Protein Viewer:ENSP00000261994.4Re-query CCDS DB by Nucleotide ID:ENST00000261994Re-query CCDS DB by Protein ID:ENSP00000261994
Original member Current member EBI ENST00000393096.5 ENSP00000376809.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393096.5Link to Ensembl Protein Viewer:ENSP00000376809.1Re-query CCDS DB by Nucleotide ID:ENST00000393096Re-query CCDS DB by Protein ID:ENSP00000376809
Original member Current member EBI ENST00000554173.1 ENSP00000450971.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000554173.1Link to Ensembl Protein Viewer:ENSP00000450971.1Re-query CCDS DB by Nucleotide ID:ENST00000554173Re-query CCDS DB by Protein ID:ENSP00000450971
Original member Current member NCBI NM_001100607.3 NP_001094077.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001100607.3Link to Protein Sequence:NP_001094077.1Re-query CCDS DB by Nucleotide ID:NM_001100607Re-query CCDS DB by Protein ID:NP_001094077Link to BLAST:NP_001094077.1
Original member Current member NCBI NM_016186.3 NP_057270.1 Accepted alive Link to Nucleotide Sequence:NM_016186.3Link to Protein Sequence:NP_057270.1Re-query CCDS DB by Nucleotide ID:NM_016186Re-query CCDS DB by Protein ID:NP_057270Link to BLAST:NP_057270.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001094077.1 444 Q9UK55 444 100% 0 0
NP_057270.1 444 Q9UK55 444 100% 0 0

Chromosomal Locations for CCDS 9923.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 94283965 94284156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94286108 94286258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94288286 94288559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94289876 94290593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1335 nt):
ATGAAGGTGGTGCCAAGTCTCCTGCTCTCCGTCCTCCTGGCACAGGTGTGGCTGGTACCCGGCTTGGCCC
CCAGTCCTCAGTCGCCAGAGACCCCAGCCCCTCAGAACCAGACCAGCAGGGTAGTGCAGGCTCCCAAGGA
GGAAGAGGAAGATGAGCAGGAGGCCAGCGAGGAGAAGGCCAGTGAGGAAGAGAAAGCCTGGCTGATGGCC
AGCAGGCAGCAGCTTGCCAAGGAGACTTCAAACTTCGGATTCAGCCTGCTGCGAAAGATCTCCATGAGGC
ACGATGGCAACATGGTCTTCTCTCCATTTGGCATGTCCTTGGCCATGACAGGCTTGATGCTGGGGGCCAC
AGGGCCGACTGAAACCCAGATCAAGAGAGGGCTCCACTTGCAGGCCCTGAAGCCCACCAAGCCCGGGCTC
CTGCCTTCCCTCTTTAAGGGACTCAGAGAGACCCTCTCCCGCAACCTGGAACTGGGCCTCACACAGGGGA
GTTTTGCCTTCATCCACAAGGATTTTGATGTCAAAGAGACTTTCTTCAATTTATCCAAGAGGTATTTTGA
TACAGAGTGCGTGCCTATGAATTTTCGCAATGCCTCACAGGCCAAAAGGCTCATGAATCATTACATTAAC
AAAGAGACTCGGGGGAAAATTCCCAAACTGTTTGATGAGATTAATCCTGAAACCAAATTAATTCTTGTGG
ATTACATCTTGTTCAAAGGGAAATGGTTGACCCCATTTGACCCTGTCTTCACCGAAGTCGACACTTTCCA
CCTGGACAAGTACAAGACCATTAAGGTGCCCATGATGTACGGTGCAGGCAAGTTTGCCTCCACCTTTGAC
AAGAATTTTCGTTGTCATGTCCTCAAACTGCCCTACCAAGGAAATGCCACCATGCTGGTGGTCCTCATGG
AGAAAATGGGTGACCACCTCGCCCTTGAAGACTACCTGACCACAGACTTGGTGGAGACATGGCTCAGAAA
CATGAAAACCAGAAACATGGAAGTTTTCTTTCCGAAGTTCAAGCTAGATCAGAAGTATGAGATGCATGAG
CTGCTTAGGCAGATGGGAATCAGAAGAATCTTCTCACCCTTTGCTGACCTTAGTGAACTCTCAGCTACTG
GAAGAAATCTCCAAGTATCCAGGGTTTTACAAAGAACAGTGATTGAAGTTGATGAAAGGGGCACTGAGGC
AGTGGCAGGAATCTTGTCAGAAATTACTGCTTATTCCATGCCTCCTGTCATCAAAGTGGACCGGCCATTT
CATTTCATGATCTATGAAGAAACCTCTGGAATGCTTCTGTTTCTGGGCAGGGTGGTGAATCCGACTCTCC
TATAA

Translation (444 aa):
MKVVPSLLLSVLLAQVWLVPGLAPSPQSPETPAPQNQTSRVVQAPKEEEEDEQEASEEKASEEEKAWLMA
SRQQLAKETSNFGFSLLRKISMRHDGNMVFSPFGMSLAMTGLMLGATGPTETQIKRGLHLQALKPTKPGL
LPSLFKGLRETLSRNLELGLTQGSFAFIHKDFDVKETFFNLSKRYFDTECVPMNFRNASQAKRLMNHYIN
KETRGKIPKLFDEINPETKLILVDYILFKGKWLTPFDPVFTEVDTFHLDKYKTIKVPMMYGAGKFASTFD
KNFRCHVLKLPYQGNATMLVVLMEKMGDHLALEDYLTTDLVETWLRNMKTRNMEVFFPKFKLDQKYEMHE
LLRQMGIRRIFSPFADLSELSATGRNLQVSRVLQRTVIEVDERGTEAVAGILSEITAYSMPPVIKVDRPF
HFMIYEETSGMLLFLGRVVNPTLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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