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Report for CCDS10558.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10558.1 Public Homo sapiens 16 NTAN1 24 110 108 CCDS HistoryNCBI Gene:123803Re-query CCDS DB by CCDS ID:10558.1Re-query CCDS DB by GeneID:123803See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10558.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000287706.8 ENSP00000287706.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000287706.8Link to Ensembl Protein Viewer:ENSP00000287706.3Re-query CCDS DB by Nucleotide ID:ENST00000287706Re-query CCDS DB by Protein ID:ENSP00000287706
Original member Current member NCBI NM_173474.4 NP_775745.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173474.4Link to Protein Sequence:NP_775745.1Re-query CCDS DB by Nucleotide ID:NM_173474Re-query CCDS DB by Protein ID:NP_775745Link to BLAST:NP_775745.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775745.1 310 Q96AB6 310 100% 0 0

Chromosomal Locations for CCDS 10558.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 15038031 15038210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15038574 15038687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15039969 15040066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15041068 15041121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15041623 15041676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15044334 15044407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15047442 15047550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15047855 15047920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15047997 15048099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15055891 15055971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (933 nt):
ATGCCGCTGCTCGTCGAGGGGCGGCGAGTGCGGCTGCCGCAGTCAGCCGGGGACCTCGTCCGAGCCCACC
CGCCTTTGGAGGAAAGAGCCAGACTTCTCAGAGGTCAGTCTGTTCAACAAGTGGGACCCCAGGGCCTTCT
GTATGTTCAGCAAAGAGAGCTTGCAGTGACCTCCCCAAAGGATGGCTCCATCTCCATTCTGGGTTCTGAT
GATGCCACTACTTGTCACATTGTGGTCCTGAGGCACACAGGTAATGGGGCCACCTGCTTGACACATTGTG
ACGGAACCGACACCAAAGCTGAGGTCCCCTTGATCATGAACTCCATAAAATCCTTTTCTGACCACGCTCA
ATGTGGAAGGCTGGAAGTACACCTTGTTGGAGGCTTCAGTGACGACAGGCAGTTGTCACAAAAACTCACT
CATCAACTTCTTAGTGAATTTGACAGGCAAGAAGATGACATTCACTTAGTGACATTATGTGTGACAGAAT
TAAATGACCGGGAAGAAAACGAAAACCACTTTCCAGTAATATATGGCATTGCTGTCAACATTAAGACTGC
AGAGATTTACAGAGCATCCTTTCAAGATCGGGGTCCGGAGGAGCAGCTTCGTGCTGCGCGAACTTTAGCA
GGAGGACCAATGATTAGCATTTATGATGCAGAGACAGAACAACTTCGTATAGGACCGTACTCCTGGACAC
CATTTCCACATGTGGATTTCTGGTTGCACCAAGATGACAAGCAAATACTAGAGAATCTTTCCACTTCGCC
TCTGGCTGAGCCACCCCACTTTGTTGAACATATTAGATCTACCTTGATGTTTTTAAAAAAACACCCATCT
CCAGCTCACACACTGTTTTCTGGAAATAAAGCCCTACTCTACAAAAAAAATGAAGATGGCTTGTGGGAAA
AGATCTCTTCTCCAGGAAGTTAA

Translation (310 aa):
MPLLVEGRRVRLPQSAGDLVRAHPPLEERARLLRGQSVQQVGPQGLLYVQQRELAVTSPKDGSISILGSD
DATTCHIVVLRHTGNGATCLTHCDGTDTKAEVPLIMNSIKSFSDHAQCGRLEVHLVGGFSDDRQLSQKLT
HQLLSEFDRQEDDIHLVTLCVTELNDREENENHFPVIYGIAVNIKTAEIYRASFQDRGPEEQLRAARTLA
GGPMISIYDAETEQLRIGPYSWTPFPHVDFWLHQDDKQILENLSTSPLAEPPHFVEHIRSTLMFLKKHPS
PAHTLFSGNKALLYKKNEDGLWEKISSPGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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