NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS10596.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10596.1 Public Homo sapiens 16 ZP2 24 110 108 CCDS HistoryNCBI Gene:7783Re-query CCDS DB by CCDS ID:10596.1Re-query CCDS DB by GeneID:7783See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 10596.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000574091.6 ENSP00000458991.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000574091.6Link to Ensembl Protein Viewer:ENSP00000458991.2Re-query CCDS DB by Nucleotide ID:ENST00000574091Re-query CCDS DB by Protein ID:ENSP00000458991
Original member Current member EBI ENST00000574002.1 ENSP00000460971.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000574002.1Link to Ensembl Protein Viewer:ENSP00000460971.1Re-query CCDS DB by Nucleotide ID:ENST00000574002Re-query CCDS DB by Protein ID:ENSP00000460971
Original member Current member NCBI NM_001376232.1 NP_001363161.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001376232.1Link to Protein Sequence:NP_001363161.1Re-query CCDS DB by Nucleotide ID:NM_001376232Re-query CCDS DB by Protein ID:NP_001363161Link to BLAST:NP_001363161.1
Original member Current member NCBI NM_003460.2 NP_003451.1 Accepted alive Link to Nucleotide Sequence:NM_003460.2Link to Protein Sequence:NP_003451.1Re-query CCDS DB by Nucleotide ID:NM_003460Re-query CCDS DB by Protein ID:NP_003451Link to BLAST:NP_003451.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001363161.1 745 Q05996-1 745 100% 0 0
NP_003451.1 745 Q05996-1 745 100% 0 0

Chromosomal Locations for CCDS 10596.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 21197480 21197622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21197766 21197849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21198779 21198862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21199570 21199666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21199743 21199878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21201369 21201558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21201706 21201830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21201932 21202023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21202104 21202291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21203125 21203251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21204030 21204211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21204308 21204404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21205420 21205584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21205731 21205775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21206838 21206990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21209631 21209725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21210109 21210192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21211307 21211395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21211486 21211547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2238 nt):
ATGGCGTGCAGGCAGAGAGGAGGCTCTTGGAGTCCCTCAGGCTGGTTCAATGCAGGCTGGAGCACCTACA
GGTCGATTTCTCTCTTCTTCGCCCTTGTGACTTCAGGGAACTCCATAGATGTTTCTCAGTTGGTAAATCC
TGCCTTTCCAGGCACTGTCACTTGCGATGAAAGGGAAATAACAGTGGAGTTCCCAAGCAGTCCTGGCACC
AAGAAATGGCATGCATCTGTGGTGGATCCTCTTGGTCTCGACATGCCGAACTGCACTTACATCCTGGACC
CAGAAAAGCTCACCCTGAGGGCTACCTATGATAACTGTACCAGGAGAGTGCATGGTGGACACCAGATGAC
CATCAGAGTCATGAACAACAGTGCTGCCTTAAGACACGGAGCTGTCATGTATCAGTTCTTCTGTCCAGCT
ATGCAAGTAGAAGAGACCCAGGGGCTTTCAGCATCTACAATCTGCCAGAAGGATTTCATGTCTTTTTCCT
TGCCACGGGTCTTCTCTGGCTTGGCTGACGACAGTAAGGGGACCAAAGTTCAGATGGGATGGAGCATTGA
GGTTGGTGATGGTGCAAGAGCCAAAACTCTGACCCTGCCAGAGGCCATGAAGGAAGGCTTCAGCCTCTTG
ATTGACAACCACAGGATGACCTTCCATGTGCCATTCAATGCCACTGGAGTGACTCACTATGTGCAAGGTA
ACAGTCATCTCTACATGGTGTCTCTGAAGCTTACATTTATATCTCCTGGACAGAAGGTGATCTTCTCTTC
ACAAGCTATTTGTGCACCAGATCCTGTGACCTGCAATGCCACACACATGACTCTCACCATACCAGAGTTT
CCTGGGAAGCTTAAGTCTGTGAGCTTTGAAAACCAGAACATTGATGTGAGCCAGCTGCATGACAATGGAA
TTGATCTAGAAGCAACAAATGGCATGAAATTGCATTTCAGCAAAACTCTGCTCAAAACGAAATTATCTGA
AAAATGCCTACTCCATCAGTTCTACTTAGCTTCACTCAAGCTGACCTTTCTCCTTCGGCCAGAGACAGTA
TCCATGGTGATCTATCCTGAGTGTCTCTGTGAGTCACCCGTTTCTATAGTTACAGGGGAGCTGTGCACCC
AGGATGGGTTTATGGACGTCGAGGTCTACAGCTACCAAACACAACCAGCTCTTGACCTGGGTACTCTGAG
GGTGGGAAACTCATCCTGCCAGCCTGTCTTTGAGGCTCAGTCTCAGGGGCTGGTACGGTTCCACATACCC
CTGAATGGATGTGGAACGAGATATAAGTTCGAAGATGATAAAGTCGTCTATGAAAACGAAATACATGCTC
TCTGGACGGATTTTCCTCCAAGCAAAATATCTAGAGACAGTGAGTTCAGAATGACAGTGAAGTGTTCTTA
TAGCAGGAATGACATGCTACTAAACATCAACGTTGAAAGCCTTACTCCTCCAGTGGCCTCAGTGAAGTTG
GGTCCATTTACCTTGATCCTGCAAAGCTACCCAGATAATTCCTACCAACAACCTTATGGGGAAAACGAGT
ACCCTCTAGTGAGATTCCTCCGCCAACCAATTTACATGGAAGTGAGAGTCCTAAACAGGGATGACCCCAA
CATCAAGCTGGTCTTAGATGACTGCTGGGCGACGTCCACCATGGATCCAGACTCTTTCCCCCAGTGGAAC
GTTGTCGTGGATGGCTGTGCATATGACCTGGACAACTACCAGACCACCTTCCATCCAGTCGGCTCCTCTG
TGACCCATCCTGATCACTATCAGAGGTTTGACATGAAGGCTTTTGCCTTTGTATCAGAAGCCCACGTGCT
CTCTAGCCTGGTCTACTTCCACTGCAGTGCCTTAATCTGTAATCGACTCTCCCCTGACTCCCCACTGTGT
TCTGTGACCTGCCCTGTGTCCTCTAGGCACAGGCGAGCCACAGGGGCCACTGAAGCAGAGAAAATGACAG
TCAGCCTCCCAGGACCCATTCTCCTGTTGTCAGATGACTCCTCATTCAGAGGTGTCGGCTCATCTGATCT
AAAAGCAAGTGGGAGCAGTGGGGAGAAGAGTAGGAGTGAAACAGGGGAGGAGGTTGGCTCACGAGGTGCT
ATGGACACCAAAGGGCACAAGACTGCTGGAGATGTTGGTTCCAAAGCTGTGGCTGCTGTGGCTGCCTTTG
CAGGTGTGGTGGCAACTCTAGGCTTCATCTACTACCTGTACGAGAAAAGGACTGTGTCAAATCACTAA

Translation (745 aa):
MACRQRGGSWSPSGWFNAGWSTYRSISLFFALVTSGNSIDVSQLVNPAFPGTVTCDEREITVEFPSSPGT
KKWHASVVDPLGLDMPNCTYILDPEKLTLRATYDNCTRRVHGGHQMTIRVMNNSAALRHGAVMYQFFCPA
MQVEETQGLSASTICQKDFMSFSLPRVFSGLADDSKGTKVQMGWSIEVGDGARAKTLTLPEAMKEGFSLL
IDNHRMTFHVPFNATGVTHYVQGNSHLYMVSLKLTFISPGQKVIFSSQAICAPDPVTCNATHMTLTIPEF
PGKLKSVSFENQNIDVSQLHDNGIDLEATNGMKLHFSKTLLKTKLSEKCLLHQFYLASLKLTFLLRPETV
SMVIYPECLCESPVSIVTGELCTQDGFMDVEVYSYQTQPALDLGTLRVGNSSCQPVFEAQSQGLVRFHIP
LNGCGTRYKFEDDKVVYENEIHALWTDFPPSKISRDSEFRMTVKCSYSRNDMLLNINVESLTPPVASVKL
GPFTLILQSYPDNSYQQPYGENEYPLVRFLRQPIYMEVRVLNRDDPNIKLVLDDCWATSTMDPDSFPQWN
VVVDGCAYDLDNYQTTFHPVGSSVTHPDHYQRFDMKAFAFVSEAHVLSSLVYFHCSALICNRLSPDSPLC
SVTCPVSSRHRRATGATEAEKMTVSLPGPILLLSDDSSFRGVGSSDLKASGSSGEKSRSETGEEVGSRGA
MDTKGHKTAGDVGSKAVAAVAAFAGVVATLGFIYYLYEKRTVSNH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH