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Report for CCDS11146.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11146.1 Public Homo sapiens 17 MFSD6L 24 110 108 CCDS HistoryNCBI Gene:162387Re-query CCDS DB by CCDS ID:11146.1Re-query CCDS DB by GeneID:162387See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11146.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000329805.6 ENSP00000330051.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000329805.6Link to Ensembl Protein Viewer:ENSP00000330051.4Re-query CCDS DB by Nucleotide ID:ENST00000329805Re-query CCDS DB by Protein ID:ENSP00000330051
Original member Current member NCBI NM_152599.4 NP_689812.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152599.4Link to Protein Sequence:NP_689812.3Re-query CCDS DB by Nucleotide ID:NM_152599Re-query CCDS DB by Protein ID:NP_689812Link to BLAST:NP_689812.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689812.3 586 Q8IWD5 586 100% 0 0

Chromosomal Locations for CCDS 11146.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 8797360 8799120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1761 nt):
ATGAGTGCCAACCCCCGGTGGGACATCAGCAGGGCGCTGGGGGTGGCCAAGCTCTTCCACCTGGTGTGCG
GGGTGCGGGAAGCCTGCGTGACCCCGTTCCTGACCCTTTACCTGAGGCAGCTGGGCTTGGCCGCGCCCTG
GGTGGGCACCCTAATGGGAACCAAGCACCTAATCGCTGCCTTCTGGGCTCCCGTCTGTGCCTTCCTGGCC
AAAAGCTACCGGAAAAGGAGAGCGCTTCTGATCGGCTCCCTGCTCGGCTCGGTGGGGGCCAGCCTGCTGA
TGGTCCTGGTCCCACCGGTAGACAAAAATCGGGTGCACTTCCCTTGTAATGGAAGCAGCGGCCTGACCAG
CACAGACGCACTCCCGGGGGTCACGCTACCTGTGAACATCACCTCGGCCCAAGAGTCTGCCTCCAGCCAC
CCAGCCAAGAGGACTGCAGAGGTGGAAATGCCTGGCTTCAGAAACCCACCTGGTGAAAGTGACCGAGAAA
CTTTCCGTGATCTGCACGTCTACTTAGCGCCCTCCGTTGAAGGAGCTAGGACCACATCCCAAGCTCTCCT
CCATCCTGTCACTTCGGGGCTGAAAGATCATCCCTGGGAAGTTACTTTTGAGGTGGTCAAGACAGCCCTC
CCCTTGCTTCCTGGGGGGAAAGGGCCCGGGAATCCAGCCAATTTGTCAGGGACCAAGGGGAAAGCCTGGG
CTTTTGACCTGTCCTTGGAGGCGTTGCGGCGGACTTTTATCCTCTCCTTGGGGTCCGTGGCGTTCTGGGA
GCTGCTGACAGCGCCTCTGGAGCAGGTGGCAGATGACAGCCTTTATGAGTTCCTGGATTTTGTGGATGCC
ACTGACCGATACAGAAGCCTGTGGGTCTGGAGGTTGCTGGGCATGTCGGCAGGCGTGTGTGGCATCACAG
CCTTGGTGGGGCAGCTGGACTGCTTCCTGATGACCAGTGGCCCCCGAGGTGTGGTCCACTTCTATGGGTA
CTCGGTGGTCAGCACCCTGGCCTTACTGGTGAGCATTGCCTTTCCCATTCCCATCTGTCAGCAGTGGGAG
CCCAGCTACAAAAGGGTCAAAGCACTGTCCATTGTGGGGGGTGACCCCCACCTCATTCTCCTCGCCTCCA
CCACTGTTTTGGTAGGAGCCATCGTCAGTACTGTCCAGAACTTTCTGTTCTGGCACATGAAGGACCATGG
GAGCGGCGAGCTGGTCATGGGTTTCTCGGTCGCCCTCAGCTTGCTGGGGGAAATTCTGCTTCATCCGTTC
AAAGCTACATTGCTTAGGAAACTGTCCAGGACGGGCCTGGTGGGGCTGGGGCTGAGCTGCCTCGCTGGGC
AGCTGCTGTACTACTCTTTCCTCTGGAGCTGGTGGTCCGTCCTCCCCATTCAGATCTTGAGTGCCATTAG
CAACAGAGCTTTGTGGTGGGCTGTGGGGGCCTCAGTAGAGGACCTGGCCACTCCCCGCATGGAGAGGGCT
CTGAGTGCCTTGTTCCGAGGCCACTTTTACGGGAGTGGCTGTAGCCTGGGCAGCTTTGTCGGGGGCTTCG
TGGTGATGCGCTTCAGCCTGGCTGTGCTCTACCAGGCCTGCTGTGTGGCCCTGTTGCTCTGGTTGGCCTT
GCTCCTGTCCATACAGCGGAGGCTGCCCCGAGAGCGGAAAATCAAGTACTCGAAGCTGCTGTCCATGGAG
GTGAGTGACACCAGTGACTCTGAGCAGGGGACAGAACAGGACTGGCTTGTGAAGGCCATGAGGGAGGAAC
ACTCAGACTGA

Translation (586 aa):
MSANPRWDISRALGVAKLFHLVCGVREACVTPFLTLYLRQLGLAAPWVGTLMGTKHLIAAFWAPVCAFLA
KSYRKRRALLIGSLLGSVGASLLMVLVPPVDKNRVHFPCNGSSGLTSTDALPGVTLPVNITSAQESASSH
PAKRTAEVEMPGFRNPPGESDRETFRDLHVYLAPSVEGARTTSQALLHPVTSGLKDHPWEVTFEVVKTAL
PLLPGGKGPGNPANLSGTKGKAWAFDLSLEALRRTFILSLGSVAFWELLTAPLEQVADDSLYEFLDFVDA
TDRYRSLWVWRLLGMSAGVCGITALVGQLDCFLMTSGPRGVVHFYGYSVVSTLALLVSIAFPIPICQQWE
PSYKRVKALSIVGGDPHLILLASTTVLVGAIVSTVQNFLFWHMKDHGSGELVMGFSVALSLLGEILLHPF
KATLLRKLSRTGLVGLGLSCLAGQLLYYSFLWSWWSVLPIQILSAISNRALWWAVGASVEDLATPRMERA
LSALFRGHFYGSGCSLGSFVGGFVVMRFSLAVLYQACCVALLLWLALLLSIQRRLPRERKIKYSKLLSME
VSDTSDSEQGTEQDWLVKAMREEHSD


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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