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Report for CCDS14074.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14074.2 Public Homo sapiens 22 GTSE1 24 110 108 CCDS HistoryNCBI Gene:51512Re-query CCDS DB by CCDS ID:14074.2Re-query CCDS DB by GeneID:51512See the combined annotation on chromosome 22 in Sequence Viewer

Public Note for CCDS 14074.1
The coding region has been updated to extend the N-terminus to one that is more supported by available transcript and conservation data.

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 14074.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000454366.2 ENSP00000415430.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000454366.2Link to Ensembl Protein Viewer:ENSP00000415430.1Re-query CCDS DB by Nucleotide ID:ENST00000454366Re-query CCDS DB by Protein ID:ENSP00000415430
Original member Current member NCBI NM_016426.7 NP_057510.5 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016426.7Link to Protein Sequence:NP_057510.5Re-query CCDS DB by Nucleotide ID:NM_016426Re-query CCDS DB by Protein ID:NP_057510Link to BLAST:NP_057510.5

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057510.5 739 Q9NYZ3 739 100% 0 0

Chromosomal Locations for CCDS 14074.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 46297401 46297479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 46308150 46308207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 46308319 46308943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 46312141 46312305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 46313890 46314013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 46316032 46316412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 46323190 46323262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 46326436 46326654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 46328688 46328889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 46329358 46329567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 46330047 46330130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2220 nt):
ATGGAAGGAGGCGGCGGCCGCGATGAGCCTTCAGCCTGCCGGGCAGGGGACGTGAACATGGATGACCCTA
AGAAGGAAGACATTCTTCTTTTGGCCGATGAAAAATTTGACTTCGATCTTTCATTGTCTTCTTCGAGTGC
AAATGAAGATGATGAAGTCTTCTTCGGACCCTTTGGACATAAAGAAAGATGTATTGCTGCCAGCTTGGAA
TTAAATAATCCGGTTCCCGAACAGCCTCCGTTGCCCACATCTGAGAGTCCCTTTGCCTGGAGCCCTCTGG
CCGGGGAGAAGTTCGTGGAGGTGTACAAAGAAGCTCACTTACTGGCTTTACACATTGAGAGCAGCAGCCG
GAACCAGGCAGCCCAAGCTGCCAAGCCTGAAGACCCTCGGAGCCAGGGCGTGGAAAGATTCATACAGGAG
TCAAAATTAAAAATAAACCTCTTTGAGAAAGAAAAGGAAATGAAGAAAAGCCCCACGTCTCTTAAAAGGG
AGACATACTACCTGTCAGACAGCCCCTTGCTGGGGCCCCCTGTGGGTGAGCCTCGGCTCTTGGCCTCCTC
CCCGGCCCTGCCCAGCTCTGGTGCCCAGGCCCGCCTCACCCGGGCGCCGGGGCCTCCGCACTCTGCTCAT
GCTTTGCCCAGGGAATCATGCACTGCTCATGCTGCAAGTCAGGCAGCGACTCAGAGGAAGCCCGGGACCA
AATTGCTGCTGCCTCGAGCGGCCTCTGTTAGAGGAAGAAGCATCCCTGGGGCTGCGGAGAAGCCCAAGAA
AGAGATTCCAGCTAGTCCTTCCAGGACAAAAATCCCAGCTGAGAAGGAATCCCACCGGGATGTTCTCCCT
GACAAACCTGCCCCGGGTGCTGTCAATGTGCCGGCCGCCGGAAGCCACTTGGGCCAGGGCAAGCGGGCGA
TCCCTGTTCCAAACAAGTTGGGGCTGAAGAAGACCCTGTTAAAAGCACCCGGCTCTACCAGCAATCTCGC
AAGGAAGTCCTCCTCGGGGCCTGTTTGGAGCGGGGCATCCAGTGCGTGCACATCCCCAGCAGTGGGCAAA
GCTAAATCAAGTGAATTTGCAAGTATTCCTGCAAATAGCTCCCGGCCTCTGTCAAACATCAGCAAGTCAG
GCAGAATGGGACCCGCCATGCTGCGGCCAGCTCTGCCTGCAGGCCCTGTGGGGGCATCCTCCTGGCAGGC
CAAGCGGGTCGATGTTTCTGAGCTGGCAGCGGAGCAGCTCACGGCACCCCCCTCAGCATCCCCCACCCAA
CCCCAGACTCCGGAAGGTGGCGGCCAGTGGCTGAACTCCAGTTGCGCTTGGTCAGAATCTTCTCAATTGA
ATAAGACTAGAAGTATCAGACGGCGAGATTCCTGTCTAAATTCCAAGACAAAGGTTATGCCTACTCCTAC
AAATCAATTTAAAATTCCTAAGTTTTCTATTGGTGACTCCCCGGACAGCTCAACACCAAAGCTTTCGCGG
GCACAGCGGCCGCAGTCGTGCACGTCAGTTGGCAGGGTCACTGTCCACAGCACCCCGGTTAGACGCTCAT
CTGGGCCAGCACCACAAAGCCTGCTGAGCGCATGGCGTGTGTCAGCCTTGCCCACACCCGCCAGCCGGCG
CTGCTCTGGCCTTCCACCGATGACCCCCAAAACGATGCCCAGGGCCGTGGGCTCTCCCCTGTGTGTGCCA
GCTCGGAGACGTTCCTCTGAGCCCCGCAAGAACTCTGCAATGAGAACTGAACCAACAAGGGAGAGCAACA
GAAAGACAGATTCCAGGCTGGTGGATGTGTCCCCTGACAGGGGTTCTCCTCCTTCCCGTGTGCCTCAGGC
ACTTAACTTTTCTCCAGAGGAAAGCGATTCTACTTTCTCCAAAAGTACTGCCACAGAAGTAGCTCGGGAG
GAAGCCAAGCCGGGTGGAGATGCAGCCCCTAGTGAGGCTCTTCTTGTAGATATCAAACTGGAACCACTCG
CGGTCACTCCAGATGCTGCAAGCCAGCCCCTCATTGACCTTCCTCTCATCGACTTCTGCGATACCCCAGA
AGCACACGTGGCTGTAGGATCTGAAAGCAGGCCTCTGATCGACCTCATGACAAACACTCCAGACATGAAT
AAAAATGTGGCCAAACCTTCACCGGTGGTGGGACAGCTCATAGACCTGAGCTCCCCTCTGATCCAGCTGA
GCCCTGAGGCTGACAAGGAGAACGTGGATTCCCCACTCCTCAAGTTCTAA

Translation (739 aa):
MEGGGGRDEPSACRAGDVNMDDPKKEDILLLADEKFDFDLSLSSSSANEDDEVFFGPFGHKERCIAASLE
LNNPVPEQPPLPTSESPFAWSPLAGEKFVEVYKEAHLLALHIESSSRNQAAQAAKPEDPRSQGVERFIQE
SKLKINLFEKEKEMKKSPTSLKRETYYLSDSPLLGPPVGEPRLLASSPALPSSGAQARLTRAPGPPHSAH
ALPRESCTAHAASQAATQRKPGTKLLLPRAASVRGRSIPGAAEKPKKEIPASPSRTKIPAEKESHRDVLP
DKPAPGAVNVPAAGSHLGQGKRAIPVPNKLGLKKTLLKAPGSTSNLARKSSSGPVWSGASSACTSPAVGK
AKSSEFASIPANSSRPLSNISKSGRMGPAMLRPALPAGPVGASSWQAKRVDVSELAAEQLTAPPSASPTQ
PQTPEGGGQWLNSSCAWSESSQLNKTRSIRRRDSCLNSKTKVMPTPTNQFKIPKFSIGDSPDSSTPKLSR
AQRPQSCTSVGRVTVHSTPVRRSSGPAPQSLLSAWRVSALPTPASRRCSGLPPMTPKTMPRAVGSPLCVP
ARRRSSEPRKNSAMRTEPTRESNRKTDSRLVDVSPDRGSPPSRVPQALNFSPEESDSTFSKSTATEVARE
EAKPGGDAAPSEALLVDIKLEPLAVTPDAASQPLIDLPLIDFCDTPEAHVAVGSESRPLIDLMTNTPDMN
KNVAKPSPVVGQLIDLSSPLIQLSPEADKENVDSPLLKF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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