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Report for CCDS14991.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14991.1 Public Mus musculus 1 Abi2 23 108 98 CCDS HistoryNCBI Gene:329165Re-query CCDS DB by CCDS ID:14991.1Re-query CCDS DB by GeneID:329165See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14991.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000052332.14 ENSMUSP00000058754.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000052332.14Link to Ensembl Protein Viewer:ENSMUSP00000058754.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000052332Re-query CCDS DB by Protein ID:ENSMUSP00000058754
Original member NCBI NM_198127.2 NP_937760.1 Updated not alive Link to Nucleotide Sequence:NM_198127.2Link to Protein Sequence:NP_937760.1Re-query CCDS DB by Nucleotide ID:NM_198127Re-query CCDS DB by Protein ID:NP_937760
Current member NCBI NM_198127.3 NP_937760.1 Accepted alive Link to Nucleotide Sequence:NM_198127.3Link to Protein Sequence:NP_937760.1Re-query CCDS DB by Nucleotide ID:NM_198127Re-query CCDS DB by Protein ID:NP_937760Link to BLAST:NP_937760.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_937760.1 446 P62484 446 100% 0 0

Chromosomal Locations for CCDS 14991.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 60409803 60409919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 60434243 60434410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 60437056 60437232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 60443985 60444082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 60447260 60447406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 60448078 60448202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 60453604 60453762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 60470666 60470839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 60476740 60476915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1341 nt):
ATGGCGGAGCTGCAGATGCTGCTGGAAGAGGAAATCCCGGGGGGCCGCCGGGCTCTCTTCGACAGCTACA
CGAATCTGGAGCGGGTGGCCGACTACTGCGAGAATAACTACATCCAGTCACCAGATAAGCAGCGAGCCCT
AGAAGAAACCAAAGCCTACACCACTCAATCCTTAGCAAGTGTTGCGTATCTGATAAACACCTTGGCCAAC
AATGTCCTACAGATGCTGGATATCCAGGCATCACAGTTACGGAGGATGGAGTCTTCAATCAACCATATTT
CACAAACAGTTGATATTCATAAAGAGAAGGTTGCAAGAAGAGAAATTGGTATTTTGACCACCAATAAAAA
CACTTCAAGGACCCATAAGATTATTGCGCCAGCCAACCTTGAGCGGCCAGTTCGTTATATTCGAAAACCT
ATTGACTACACAATTTTAGATGACATTGGACATGGAGTGAAGGTGAGTACCCAGAATATGAAAATGGGTG
GATTGCCACGTACGACACCTCCAACTCAGAAGCCCCCAAGTCCCCCTATGTCAGGGAAGGGGACACTTGG
GCGGCACTCCCCCTATCGAACACTGGAGCCAGTGCGTCCTCCAGTGGTACCAAATGATTACGTACCTAGC
CCAACCCGTAATATGGCTCCCTCGCAGCAGAGCCCTGTGAGGACAGCTTCTGTGAATCAAAGAAATCGAA
CTTACAGCAGCAGTGGGAGCAGTGGAGGAAGTCACCCAAGTAGTCGGAGCAGCAGTCGGGAGAACAGCGG
AAGTGGTAGTGTGGGGGTACCCATTGCTGTGCCTACTCCGTCTCCTCCAAGCGTCTTTCCAGGTCATCCT
GTTCAGTTCTACAGCATGAACAGGCCTGCCTCTCGCCATACACCACCTACAATAGGGGGCTCGTTGCCCT
ATAGACGTCCTCCTTCCATAACGTCACAAACAAGCCTTCAGAATCAGATGAATGGAGGTCCTTTTTATAA
CCAGAATCCAGTTTCAGATACACCACCTCCACCCCCACCTGTGGAAGAGCCAGTCTTTGATGAATCCCCC
CCTCCACCGCCTCCTCCAGAAGATTATGAAGAGGAGGAAGCAGCTGTGGTTGAGTACAGCGATCCGTACG
CTGAAGAGGACCCACCGTGGGCGCCAAGGGCTTACTTGGAAAAGGTTGTGGCAATTTATGATTATACAAA
AGACAAGGAAGATGAGCTGTCCTTTCAGGAAGGAGCCATTATATATGTCATCAAGAAGAATGACGATGGT
TGGTATGAGGGAGTTATGAATGGTGTGACCGGGCTCTTCCCTGGGAACTATGTTGAGTCCATCATGCATT
ATTCGGAGTAG

Translation (446 aa):
MAELQMLLEEEIPGGRRALFDSYTNLERVADYCENNYIQSPDKQRALEETKAYTTQSLASVAYLINTLAN
NVLQMLDIQASQLRRMESSINHISQTVDIHKEKVARREIGILTTNKNTSRTHKIIAPANLERPVRYIRKP
IDYTILDDIGHGVKVSTQNMKMGGLPRTTPPTQKPPSPPMSGKGTLGRHSPYRTLEPVRPPVVPNDYVPS
PTRNMAPSQQSPVRTASVNQRNRTYSSSGSSGGSHPSSRSSSRENSGSGSVGVPIAVPTPSPPSVFPGHP
VQFYSMNRPASRHTPPTIGGSLPYRRPPSITSQTSLQNQMNGGPFYNQNPVSDTPPPPPPVEEPVFDESP
PPPPPPEDYEEEEAAVVEYSDPYAEEDPPWAPRAYLEKVVAIYDYTKDKEDELSFQEGAIIYVIKKNDDG
WYEGVMNGVTGLFPGNYVESIMHYSE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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