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Report for CCDS15036.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15036.1 Public Mus musculus 1 Igfbp2 23 108 98 CCDS HistoryNCBI Gene:16008Re-query CCDS DB by CCDS ID:15036.1Re-query CCDS DB by GeneID:16008See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15036.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000047328.10 ENSMUSP00000046610.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000047328.10Link to Ensembl Protein Viewer:ENSMUSP00000046610.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000047328Re-query CCDS DB by Protein ID:ENSMUSP00000046610
Original member NCBI NM_008342.3 NP_032368.2 Updated not alive Link to Nucleotide Sequence:NM_008342.3Link to Protein Sequence:NP_032368.2Re-query CCDS DB by Nucleotide ID:NM_008342Re-query CCDS DB by Protein ID:NP_032368
Current member NCBI NM_008342.4 NP_032368.2 Accepted alive Link to Nucleotide Sequence:NM_008342.4Link to Protein Sequence:NP_032368.2Re-query CCDS DB by Nucleotide ID:NM_008342Re-query CCDS DB by Protein ID:NP_032368Link to BLAST:NP_032368.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032368.2 305 P47877 305 100% 0 0

Chromosomal Locations for CCDS 15036.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 72824580 72824964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 72849086 72849312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 72849564 72849704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 72851998 72852162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (918 nt):
ATGCTGCCGAGATTGGGCGGCCCCGCGCTGCCGCTGCTCCTGCCGTCGTTGCTCTTGCTGCTGCTCTTGG
GCGCGGGCGGCTGCGGCCCCGGGGTGCGCGCCGAGGTGCTGTTCCGCTGCCCACCCTGCACGCCCGAGCG
TCTGGCCGCTTGCGGGCCCCCACCCGACGCGCCCTGCGCCGAGCTGGTGCGAGAGCCCGGCTGCGGCTGC
TGCTCCGTGTGCGCACGGCAGGAGGGCGAAGCATGCGGCGTCTACATCCCGCGCTGCGCCCAGACGCTAC
GCTGCTATCCCAACCCGGGCTCCGAGCTGCCCCTGAAGGCGCTTGTCACAGGCGCGGGTACCTGTGAAAA
GAGACGCGTGGGCACCACCCCACAGCAGGTTGCAGACAGTGATGACGACCACTCTGAGGGAGGCCTGGTG
GAGAACCACGTGGATGGGACCATGAACATGTTGGGAGGTGGTAGCAGTGCTGGCCGGAAGCCCCTCAAGT
CAGGCATGAAGGAGCTGGCTGTGTTCCGGGAGAAGGTCAATGAACAGCACCGGCAGATGGGCAAGGGTGC
CAAACACCTCAGTCTGGAGGAGCCCAAGAAGTTGCGCCCGCCTCCCGCCAGGACCCCTTGCCAGCAGGAG
TTGGACCAGGTCCTGGAGCGGATCTCCACCATGCGCCTTCCGGATGATCGGGGCCCCCTGGAACATCTCT
ACTCCCTGCACATCCCCAACTGTGACAAGCATGGCCGGTACAACCTTAAGCAGTGCAAGATGTCTCTGAA
CGGACAGCGCGGGGAGTGCTGGTGTGTGAACCCCAATACCGGGAAGCCCATCCAGGGAGCTCCCACCATC
CGGGGAGACCCCGAGTGCCATCTCTTCTACAACGAGCAGCAGGAGACTGGTGGGGCCCATGCCCAAAGTG
TGCAGTAA

Translation (305 aa):
MLPRLGGPALPLLLPSLLLLLLLGAGGCGPGVRAEVLFRCPPCTPERLAACGPPPDAPCAELVREPGCGC
CSVCARQEGEACGVYIPRCAQTLRCYPNPGSELPLKALVTGAGTCEKRRVGTTPQQVADSDDDHSEGGLV
ENHVDGTMNMLGGGSSAGRKPLKSGMKELAVFREKVNEQHRQMGKGAKHLSLEEPKKLRPPPARTPCQQE
LDQVLERISTMRLPDDRGPLEHLYSLHIPNCDKHGRYNLKQCKMSLNGQRGECWCVNPNTGKPIQGAPTI
RGDPECHLFYNEQQETGGAHAQSVQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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