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Report for CCDS17765.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17765.1 Public Mus musculus 3 Wdr47 23 108 98 CCDS HistoryNCBI Gene:99512Re-query CCDS DB by CCDS ID:17765.1Re-query CCDS DB by GeneID:99512See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17765.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000051145.14 ENSMUSP00000057482.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000051145.14Link to Ensembl Protein Viewer:ENSMUSP00000057482.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000051145Re-query CCDS DB by Protein ID:ENSMUSP00000057482
Original member Current member NCBI NM_181400.3 NP_852065.2 Accepted alive Link to Nucleotide Sequence:NM_181400.3Link to Protein Sequence:NP_852065.2Re-query CCDS DB by Nucleotide ID:NM_181400Re-query CCDS DB by Protein ID:NP_852065Link to BLAST:NP_852065.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_852065.2 920 Q8CGF6 920 100% 0 0

Chromosomal Locations for CCDS 17765.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 108609886 108610043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108611356 108611439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108614333 108614417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108618490 108619292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108623323 108623449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108624557 108624735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108627203 108627460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108629692 108629767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108633061 108633218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108636991 108637160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108637893 108638063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108638626 108638757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108643062 108643280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108644446 108644588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2763 nt):
ATGACTGCTGAAGAAACGGTGAATGTGAAAGAGGTTGAGATCATTAAGCTGATTTTGGACTTCTTGAATT
CAAAGAAGCTTCACATTAGTATGCTGGCGCTGGAGAAGGAAAGTGGAGTCATAAATGGCCTGTTTTCAGA
TGATATGCTCTTCCTGAGGCAGCTGATCCTGGATGGCCAATGGGATGAAGTTCTTCAGTTCATTCAGCCT
CTAGAATGTATGGAGAAATTTGACAAAAAAAGGTTTCGTTATATTATCCTGAAGCAGAAGTTTCTAGAAG
CTTTGTGTGTTAACAATGCAATGTCTGCAGAAGATGAGCCCCAGCATTTGGAATTTACCATGCAGGAAGC
GGTGCAGTGTCTGCATGCTCTGGAGGAGTACTGCCCTTCTAAAGACGATTACAGCAAGCTATGTCTGCTC
CTCACCTTGCCTCGTTTGACCAATCACGCTGAGTTTAAGGACTGGAATCCCAGCACTGCACGAGTTCACT
GCTTTGAAGAGGTCTGTGTCATGGTTGCAGAGTTCATTCCTGCTGACAGGAAGCTAAGTGAGGCTGGTTT
TAAAGCAAGTAACAATCGCTTATTCCAGCTCGTAATGAAGGGCCTACTTTATGAATGCTGCGTAGAATTT
TGTCAGAGTAAAGCAACTGGTGAAGAAATTACAGAAAGTGAAGTCCTTCTTGGCATCGACCTGTTATGTG
GCAACGGTTGTGACGATTTAGATCTAAGTTTATTGTCTTGGCTTCAGAATCTCCCTTCTTCAGTCTTTTC
TTGTGCATTTGAACAGAAAATGCTTAATATTCATGTTGACAAACTTCTGAAGCCTACAAAAGCTGCATAT
GCTGATCTGTTGACTCCTCTTATCAGCAAACTGTCTCCCTACCCTTCATCTCCAATGAGAAGACCTCAGT
CAGCTGATGCCTATATGACTCGCTCTCTCAATCCTGCTTTGGATGGCCTCACATGTGGGTTAACCAGTCA
TGATAAGAGGATCTCAGATCTTGGGAACAAAACTTCTCCAATGTCACACTCCTTTGCTAACTTCCACTAT
CCAGGGGTACAGAACCTCAGCAGAAGTCTCATGCTTGAGAATACAGAGTGTCACAGCATCTATGAAGAAT
CTCCTGAGCGAAGTGATACGCCTGTTGAGGCCCAGCAGCCTGTGAGCAGTGAAGCCATGTGCCAGGGGTC
AGGGTTAGAAAAAGAGCCTGCAAATGGAGCACAGAACCCAGTTCCAGCTAAACAAGAAAAAAATGAGCTT
CGAGATTCCACTGAACAATTTCAGGAATATTACAGGCAAAGACTGCGGTACCAGCAGCACCTAGAACAGA
AGGAGCAACAGCGGCAGATGTACCAGCAGATGTTACTTGAAGGAGGCGTGAACCAAGAGGATGGTCCTGA
TCAGCAGCAGAATCTTACTGAACAATTCCTTAATAGGTCTATTCAGAAGCTTGGCGAATTAAATATTGGA
ATGGATAGTCTTGGTAATGAGGTGCCAGTGCTCAACCAGCAATGCAGCGGGAGCAAAAACAATGGATCAA
ATAATTCCTCTGTGACTAGTTTCAGTACACCACCCCAAGATTCCAGTCAGAGGTTAATACATGATACTGC
CAATATTCACACAAGCACTCCTCGTAATCCTGGATCAACGAATCACATCCCTTTTCATGAAGACTCACCT
TGTGGAAGCCAGAACTCATCAGAACATTCTGTCATTAAGCCATCACCTGGAGATTCTTCAGGAAATCTAT
CAAGGTCAAAAGGGGAAGAGGATGACAAGTCGAAAAAGCAGTTTGTTTGTATTAATACCCTAGAAGACAC
ACAGGCTGTTAGAGCCGTGGCGTTTCATCCAAGTGGTAGTTTATATGCTGTTGGTTCAAATTCAAAAACT
CTGAGAGTGTGTGCCTATCCAGAAAAAATGGATGCAAGTGCACACGACAATCCTAAGCAGCCAGTGGTGC
GATTTAAAAGAAACAAACATCATAAAGGATCTATTTATTGTGTGGCTTGGAGTCCGTGTGGACAGTTGTT
AGCAACAGGATCAAATGACAAATATGTAAAAGTGCTGCCCTTCAATGCAGAGACATGTAATGCAACAGGA
CCAGATCTGGAATTTAGCATGCATGATGGGACAATTCGAGATTTGGCATTTATGGAAGGCCCAGAAAGTG
GTGGAGCTATTTTAATAAGTGCTGGAGCAGGAGATTGTAACATTTATACAACAGACTGTCAAAGAGGACA
GGGTCTTCATGCTTTGAGTGGACACACTGGGCACATTTTAGCACTTTATACCTGGAGTGGGTGGATGATT
GCGTCTGGTTCCCAGGATAAGACTGTTAGATTCTGGGATCTTCGTGTACCAAGCTGTGTTCGTGTGGTTG
GCACAACATTCCATGGAACTGGCAGTGCAGTGGCATCTGTGGCTGTGGACCCCAGTGGCCGTCTCTTAGC
TACAGGTCAGGAGGACTCTAGCTGCATGCTGTACGACATAAGAGGAGGCAGAATGGTCCAGAGTTACCAC
CCTCACTCCAGTGACGTTCGCTCTGTTCGCTTCTCTCCTGGAGCTCACTATCTGCTGACAGGCTCTTACG
ATATGAAAATAAAGGTGACAGACCTGCAAGGGGACCTCACCAAGCAGCTTCCTCTCATGGTGGTGGGGGA
GCACAAGGACAAGGTGATCCAGTGCAGATGGCACACCCAGGATCTCTCCTTCCTCTCATCCTCTGCGGAC
AGAACTGTGACCCTCTGGACTTACAGTGGCTAG

Translation (920 aa):
MTAEETVNVKEVEIIKLILDFLNSKKLHISMLALEKESGVINGLFSDDMLFLRQLILDGQWDEVLQFIQP
LECMEKFDKKRFRYIILKQKFLEALCVNNAMSAEDEPQHLEFTMQEAVQCLHALEEYCPSKDDYSKLCLL
LTLPRLTNHAEFKDWNPSTARVHCFEEVCVMVAEFIPADRKLSEAGFKASNNRLFQLVMKGLLYECCVEF
CQSKATGEEITESEVLLGIDLLCGNGCDDLDLSLLSWLQNLPSSVFSCAFEQKMLNIHVDKLLKPTKAAY
ADLLTPLISKLSPYPSSPMRRPQSADAYMTRSLNPALDGLTCGLTSHDKRISDLGNKTSPMSHSFANFHY
PGVQNLSRSLMLENTECHSIYEESPERSDTPVEAQQPVSSEAMCQGSGLEKEPANGAQNPVPAKQEKNEL
RDSTEQFQEYYRQRLRYQQHLEQKEQQRQMYQQMLLEGGVNQEDGPDQQQNLTEQFLNRSIQKLGELNIG
MDSLGNEVPVLNQQCSGSKNNGSNNSSVTSFSTPPQDSSQRLIHDTANIHTSTPRNPGSTNHIPFHEDSP
CGSQNSSEHSVIKPSPGDSSGNLSRSKGEEDDKSKKQFVCINTLEDTQAVRAVAFHPSGSLYAVGSNSKT
LRVCAYPEKMDASAHDNPKQPVVRFKRNKHHKGSIYCVAWSPCGQLLATGSNDKYVKVLPFNAETCNATG
PDLEFSMHDGTIRDLAFMEGPESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILALYTWSGWMI
ASGSQDKTVRFWDLRVPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLYDIRGGRMVQSYH
PHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQGDLTKQLPLMVVGEHKDKVIQCRWHTQDLSFLSSSAD
RTVTLWTYSG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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