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Report for CCDS18206.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18206.1 Public Mus musculus 4 D630039A03Rik 23 108 98 CCDS HistoryNCBI Gene:242484Re-query CCDS DB by CCDS ID:18206.1Re-query CCDS DB by GeneID:242484See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 18206.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000063816.5 ENSMUSP00000068932.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000063816.5Link to Ensembl Protein Viewer:ENSMUSP00000068932.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000063816Re-query CCDS DB by Protein ID:ENSMUSP00000068932
Original member Current member NCBI NM_178727.2 NP_848842.1 Accepted alive Link to Nucleotide Sequence:NM_178727.2Link to Protein Sequence:NP_848842.1Re-query CCDS DB by Nucleotide ID:NM_178727Re-query CCDS DB by Protein ID:NP_848842Link to BLAST:NP_848842.1

Chromosomal Locations for CCDS 18206.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 57910100 57910611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 57915597 57915795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (711 nt):
ATGCGGATGAAAGGGTTGGCCTGCCCGTGCCCTGCTCTACCCAAGTTCTTGGAACTGGGGACCTGCTTAA
TGGCTGAGGGTTCCAGGACTCAGGCGCCAGGTCAAGGGCCTCCTGTAAACATCCAGTTTCTTCGTGCCCA
GTATGAAGGTCTGAGGAAACAGCAGAGGACCCAGGCCCACCTAATGGTGTTCCCTAAAGAAGGGACCATG
CCTACTCCGGCTGAATCGATGACCAGTGCTGTTTGGATTAACAAGGAGAGAAGGAGCTCGCTGTCACCAG
AGGAGACAGACTCCGAGGCTGAGGGGATGCTGGAGGAAGGGGACAGAAGCTGCCATCAGGCTTCTGAAAC
TCCATGGCACACATACTTAGAGCTGCATCGCTTGGTTCAAACCTTCCATCTGGAAGCCGGTCACCAAGGG
AACCCCAAGGGATACCTTGTGGAGCCAGAACCAAGGTTCTCACCCGAGGGAGACACTGATGTTTTGAAAA
ACAATCAGAAGACACAGCAGGAAGTCAAAATCCCAGAGGTAGCCCAGTGTCAAAGTCAGGAGGGCTGTGC
CCCACTGCAGGTAGCAGGCTCTAGAGCTCAGTATCTTTCTTCCACAAAGCATTTAAGGTCTGGAAAACCA
GCTTACTATCCATTTCCCCAGAGGAAACCACCCAGGATCTCCCAAGCTGCCCGGAACCTGGGCTTATATG
GCCCACCCTGA

Translation (236 aa):
MRMKGLACPCPALPKFLELGTCLMAEGSRTQAPGQGPPVNIQFLRAQYEGLRKQQRTQAHLMVFPKEGTM
PTPAESMTSAVWINKERRSSLSPEETDSEAEGMLEEGDRSCHQASETPWHTYLELHRLVQTFHLEAGHQG
NPKGYLVEPEPRFSPEGDTDVLKNNQKTQQEVKIPEVAQCQSQEGCAPLQVAGSRAQYLSSTKHLRSGKP
AYYPFPQRKPPRISQAARNLGLYGPP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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