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Report for CCDS19659.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19659.1 Public Mus musculus 5 Morn3 23 108 98 CCDS HistoryNCBI Gene:74890Re-query CCDS DB by CCDS ID:19659.1Re-query CCDS DB by GeneID:74890See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19659.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000031437.13 ENSMUSP00000031437.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000031437.13Link to Ensembl Protein Viewer:ENSMUSP00000031437.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000031437Re-query CCDS DB by Protein ID:ENSMUSP00000031437
Original member Current member NCBI NM_029112.2 NP_083388.1 Accepted alive Link to Nucleotide Sequence:NM_029112.2Link to Protein Sequence:NP_083388.1Re-query CCDS DB by Nucleotide ID:NM_029112Re-query CCDS DB by Protein ID:NP_083388Link to BLAST:NP_083388.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083388.1 241 Q8C5T4-1 241 100% 0 0

Chromosomal Locations for CCDS 19659.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 123037283 123037360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 123037676 123037860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 123039257 123039416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 123041083 123041240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 123046631 123046775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (726 nt):
ATGCCGGTCACTAAGTGTCCAAGGAAAGTAGAGCCGCCGTGGAAAGGGTGGGACCGGAAAGCCCAGAAGA
ACGGACTGAGACACCAAGTGTTTGCTGTGAACGGCGATCACTACGTGGGCGAATGGAAGGGCAACTTGAA
ACACGGGAAAGGAACACAGGTCTGGAAGAAGAGTGGTGCGGTCTATGAAGGGGATTGGAAGTTTGGGAAG
CGAGATGGTTATGGATCCCTCAGTCATCCTGACCCAGAGACCGGAAAACTCAGGAGAGTGTATTCAGGCT
GGTGGAAAGGCGATAAGAAATCGGGCTATGGGATCCAGTTTTTCGGACCCAAGGAGTATTACGAGGGTGA
GTGGTGTAACAACCAGCGCAGCGGGTGGGGACGCATGTACTACAACAACGGCGACATCTACGAGGGCCAG
TGGCAGAACGACAAGCCTGAAGGGGAGGGCATGTTGCGGCTGAAGAACGGGAACCGGTATGAGGGCATCT
GGGAGAGAGGCATGAAGAACGGGCATGGCCGTTTCTTCCACCTGGACCATGGTCAGCTGTTTGAAGGCTA
CTGGGTGGACAACGTGGCCAAGTGTGGCACCATGATCGACTTTGGCCGTGATGAGGCCCCTGAACCCACC
CAGTTCCCCATACCTAAGGTGGAGATTCTAGACCCAGATGGTGTGCTGAAGGAAGCGTTGGATAAGCTGA
TGAAGCCCGAGGAAGAGGAGGGCTGA

Translation (241 aa):
MPVTKCPRKVEPPWKGWDRKAQKNGLRHQVFAVNGDHYVGEWKGNLKHGKGTQVWKKSGAVYEGDWKFGK
RDGYGSLSHPDPETGKLRRVYSGWWKGDKKSGYGIQFFGPKEYYEGEWCNNQRSGWGRMYYNNGDIYEGQ
WQNDKPEGEGMLRLKNGNRYEGIWERGMKNGHGRFFHLDHGQLFEGYWVDNVAKCGTMIDFGRDEAPEPT
QFPIPKVEILDPDGVLKEALDKLMKPEEEEG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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