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Report for CCDS19706.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19706.1 Public Mus musculus 5 Crcp 23 108 98 CCDS HistoryNCBI Gene:12909Re-query CCDS DB by CCDS ID:19706.1Re-query CCDS DB by GeneID:12909See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 19706.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000026608.10 ENSMUSP00000026608.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000026608.10Link to Ensembl Protein Viewer:ENSMUSP00000026608.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000026608Re-query CCDS DB by Protein ID:ENSMUSP00000026608
Original member Current member NCBI NM_007761.2 NP_031787.1 Accepted alive Link to Nucleotide Sequence:NM_007761.2Link to Protein Sequence:NP_031787.1Re-query CCDS DB by Nucleotide ID:NM_007761Re-query CCDS DB by Protein ID:NP_031787Link to BLAST:NP_031787.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031787.1 148 O35427 148 100% 0 0

Chromosomal Locations for CCDS 19706.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 130029400 130029407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 130034912 130034948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 130037820 130037918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 130042206 130042300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 130048926 130048983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 130059705 130059854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (447 nt):
ATGGAAGTGAAGGATGCGAACGCAGCACTGCTCAGCAACTATGAGGTGTTCCAGTTACTAACGGATCTCA
AAGAGCAGCGGAAGGAGAGTGGGAAGAACAAGCATAGCGCTGGGCAGCAGAACTTGAACGCCATCACCTA
TGAGACACTAAAGTACATATCAAAAACACCATGTAGGAACCAGAGTCCAGCGATTGTCCAAGAATTCCTC
ACAGCAATGAAAAGCCACAAGCTGACCAAAGCGGAGAAGCTGCAGCTGCTGAATCACAGGCCGATGACTG
CGGTGGAGATCCAGCTGATGGTAGAAGAGAGTGAAGAACGGCTCACAGAGGAGCAGATCGAAGCCCTCCT
GCACACTGTCACTAGCATTCTGCCTGCAGGTCCAGAGGATGAACAGAGCAAAAGCACTAGCAATGACGTG
GCTATGGAAGAGGAGGAGCCAGCATAG

Translation (148 aa):
MEVKDANAALLSNYEVFQLLTDLKEQRKESGKNKHSAGQQNLNAITYETLKYISKTPCRNQSPAIVQEFL
TAMKSHKLTKAEKLQLLNHRPMTAVEIQLMVEESEERLTEEQIEALLHTVTSILPAGPEDEQSKSTSNDV
AMEEEEPA


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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