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Report for CCDS2036.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2036.1 Public Homo sapiens 2 MGAT4A 24 110 108 CCDS HistoryNCBI Gene:11320Re-query CCDS DB by CCDS ID:2036.1Re-query CCDS DB by GeneID:11320See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2036.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000264968.7 ENSP00000264968.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000264968.7Link to Ensembl Protein Viewer:ENSP00000264968.2Re-query CCDS DB by Nucleotide ID:ENST00000264968Re-query CCDS DB by Protein ID:ENSP00000264968
Original member Current member EBI ENST00000393487.6 ENSP00000377127.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000393487.6Link to Ensembl Protein Viewer:ENSP00000377127.1Re-query CCDS DB by Nucleotide ID:ENST00000393487Re-query CCDS DB by Protein ID:ENSP00000377127
Original member Current member EBI ENST00000409391.1 ENSP00000386841.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409391.1Link to Ensembl Protein Viewer:ENSP00000386841.1Re-query CCDS DB by Nucleotide ID:ENST00000409391Re-query CCDS DB by Protein ID:ENSP00000386841
Original member Current member NCBI NM_012214.3 NP_036346.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012214.3Link to Protein Sequence:NP_036346.1Re-query CCDS DB by Nucleotide ID:NM_012214Re-query CCDS DB by Protein ID:NP_036346Link to BLAST:NP_036346.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036346.1 535 Q9UM21-1 535 100% 0 0

Chromosomal Locations for CCDS 2036.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 98625566 98625592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98625723 98625835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98635222 98635288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98636517 98636595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98639808 98640001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98640121 98640228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98643923 98644053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98645428 98645542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98655445 98655520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98656352 98656465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98658218 98658264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98663046 98663179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98675035 98675175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98678304 98678471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98726239 98726332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1608 nt):
ATGAGGCTCCGCAATGGAACTGTAGCCACTGCTTTAGCATTTATCACTTCCTTCCTTACTTTGTCTTGGT
ATACTACATGGCAAAATGGGAAAGAAAAACTGATTGCTTATCAACGAGAATTCCTTGCTTTGAAAGAACG
TCTTCGAATAGCTGAACACAGAATCTCACAGCGCTCTTCTGAATTAAATACGATTGTGCAACAGTTCAAG
CGTGTAGGAGCAGAAACAAATGGAAGTAAGGATGCGTTGAATAAGTTTTCAGATAATACCCTAAAGCTGT
TAAAGGAGTTAACAAGCAAAAAATCTCTTCAAGTGCCAAGTATTTATTATCATTTGCCTCATTTATTGAA
AAATGAAGGAAGTCTTCAACCTGCTGTACAGATTGGCAACGGAAGAACAGGAGTTTCAATAGTCATGGGC
ATTCCCACAGTGAAGAGAGAAGTTAAATCTTACCTCATAGAAACTCTTCATTCCCTTATTGATAACCTGT
ATCCTGAAGAGAAGTTGGACTGTGTTATAGTAGTCTTCATAGGAGAGACAGATATTGATTATGTACATGG
TGTTGTAGCCAACCTGGAGAAAGAATTTTCTAAAGAAATCAGTTCTGGCTTGGTGGAAGTCATATCACCC
CCTGAAAGCTATTATCCTGACTTGACAAACCTAAAGGAGACATTTGGAGACTCCAAAGAAAGAGTAAGAT
GGAGAACAAAGCAAAACCTAGATTACTGTTTTCTAATGATGTATGCTCAAGAAAAGGGCATATATTACAT
TCAGCTTGAAGATGATATTATTGTCAAACAAAATTATTTTAATACCATAAAAAATTTTGCACTTCAACTT
TCTTCTGAGGAATGGATGATTCTAGAGTTTTCCCAGCTGGGCTTCATTGGTAAAATGTTTCAAGCGCCGG
ATCTTACTCTGATTGTAGAATTCATATTCATGTTTTACAAGGAGAAACCCATTGATTGGCTCCTGGACCA
TATTCTCTGGGTGAAAGTCTGCAACCCTGAAAAAGATGCAAAACATTGTGATAGACAGAAAGCAAATCTG
CGAATTCGCTTCAGACCTTCCCTTTTCCAACATGTTGGTCTGCACTCATCACTATCAGGAAAAATCCAAA
AACTCACGGATAAAGATTATATGAAACCATTACTTCTTAAAATCCATGTAAACCCACCTGCGGAGGTATC
TACTTCCTTGAAGGTCTACCAAGGGCATACGCTGGAGAAAACTTACATGGGAGAGGATTTCTTCTGGGCT
ATCACACCGATAGCTGGAGACTACATCTTGTTTAAATTTGATAAACCAGTCAATGTAGAAAGTTATTTGT
TCCATAGCGGCAACCAAGAACATCCTGGAGATATTCTGCTAAACACAACTGTGGAAGTTTTGCCTTTTAA
GAGTGAAGGTTTGGAAATAAGCAAAGAAACCAAAGACAAACGATTAGAAGATGGCTATTTCAGAATAGGA
AAATTTGAGAATGGTGTTGCAGAAGGAATGGTGGATCCAAGTCTCAATCCCATTTCAGCCTTTCGACTTT
CAGTTATTCAGAATTCTGCTGTTTGGGCCATTCTTAATGAGATTCATATTAAAAAAGCCACCAACTGA

Translation (535 aa):
MRLRNGTVATALAFITSFLTLSWYTTWQNGKEKLIAYQREFLALKERLRIAEHRISQRSSELNTIVQQFK
RVGAETNGSKDALNKFSDNTLKLLKELTSKKSLQVPSIYYHLPHLLKNEGSLQPAVQIGNGRTGVSIVMG
IPTVKREVKSYLIETLHSLIDNLYPEEKLDCVIVVFIGETDIDYVHGVVANLEKEFSKEISSGLVEVISP
PESYYPDLTNLKETFGDSKERVRWRTKQNLDYCFLMMYAQEKGIYYIQLEDDIIVKQNYFNTIKNFALQL
SSEEWMILEFSQLGFIGKMFQAPDLTLIVEFIFMFYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANL
RIRFRPSLFQHVGLHSSLSGKIQKLTDKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTYMGEDFFWA
ITPIAGDYILFKFDKPVNVESYLFHSGNQEHPGDILLNTTVEVLPFKSEGLEISKETKDKRLEDGYFRIG
KFENGVAEGMVDPSLNPISAFRLSVIQNSAVWAILNEIHIKKATN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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