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Report for CCDS20985.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20985.1 Public Mus musculus 7 Ceacam1 23 108 98 CCDS HistoryNCBI Gene:26365Re-query CCDS DB by CCDS ID:20985.1Re-query CCDS DB by GeneID:26365See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20985.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098668.2 ENSMUSP00000096265.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098668.2Link to Ensembl Protein Viewer:ENSMUSP00000096265.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000098668Re-query CCDS DB by Protein ID:ENSMUSP00000096265
Original member Current member NCBI NM_011926.2 NP_036056.2 Accepted alive Link to Nucleotide Sequence:NM_011926.2Link to Protein Sequence:NP_036056.2Re-query CCDS DB by Nucleotide ID:NM_011926Re-query CCDS DB by Protein ID:NP_036056Link to BLAST:NP_036056.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036056.2 341 P31809-3 341 99.7067% 0 1

Chromosomal Locations for CCDS 20985.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 25463781 25463900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25464849 25464880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25465468 25465520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25466317 25466437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25471798 25472073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25476344 25476703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25477471 25477534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1026 nt):
ATGGAGCTGGCCTCAGCACATCTCCACAAAGGGCAGGTTCCCTGGGGAGGACTACTGCTCACAGCCTCAC
TTTTAGCCTCCTGGAGCCCTGCCACCACTGCTGAAGTCACCATTGAGGCTGTGCCGCCCCAGGTTGCTGA
AGACAACAATGTTCTTCTACTTGTTCACAATCTGCCCCTGGCGCTTGGAGCCTTTGCCTGGTACAAGGGA
AACACTACGGCTATAGACAAAGAAATTGCACGATTTGTACCAAATAGTAATATGAATTTCACGGGGCAAG
CATACAGCGGCAGAGAGATAATATACAGCAATGGATCCCTGCTCTTCCAAATGATCACCATGAAGGATAT
GGGAGTCTACACACTAGATATGACAGATGAAAACTATCGTCGTACTCAGGCGACTGTGCGATTTCATGTA
CACCAGCCAGTGACTCAGCCCTTCCTCCAAGTCACCAACACCACAGTCAAAGAACTAGACTCTGTGACCC
TGACCTGCTTGTCGAATGACATTGGAGCCAACATCCAGTGGCTCTTCAATAGCCAGAGTCTTCAGCTCAC
AGAGAGAATGACACTCTCCCAGAACAACAGCATCCTCAGAATAGACCCTATTAAGAGGGAAGATGCCGGC
GAGTATCAGTGTGAAATCTCGAATCCAGTCAGCGTCAGGAGGAGCAACTCAATCAAGCTGGACATAATAT
TTGACCCAACACAAGGAGGCCTCTCAGATGGCGCCATTGCTGGCATCGTGATTGGAGTTGTGGCTGGGGT
GGCTCTAATAGCAGGGCTGGCATATTTCCTCTATTCCAGGAAGTCTGGCGGGGGAAGTGACCAGCGAGAT
CTCACAGAGCACAAACCCTCAGCCTCCAACCACAATCTGGCTCCTTCTGACAACTCTCCTAACAAGGTGG
ATGACGTCGCATACACTGTCCTGAACTTCAATTCCCAGCAACCCAACCGGCCAACTTCAGCCCCTTCTTC
TCCAAGAGCCACAGAAACAGTTTATTCAGAAGTAAAAAAGAAGTGA

Translation (341 aa):
MELASAHLHKGQVPWGGLLLTASLLASWSPATTAEVTIEAVPPQVAEDNNVLLLVHNLPLALGAFAWYKG
NTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMGVYTLDMTDENYRRTQATVRFHV
HQPVTQPFLQVTNTTVKELDSVTLTCLSNDIGANIQWLFNSQSLQLTERMTLSQNNSILRIDPIKREDAG
EYQCEISNPVSVRRSNSIKLDIIFDPTQGGLSDGAIAGIVIGVVAGVALIAGLAYFLYSRKSGGGSDQRD
LTEHKPSASNHNLAPSDNSPNKVDDVAYTVLNFNSQQPNRPTSAPSSPRATETVYSEVKKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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