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Report for CCDS21061.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21061.1 Public Mus musculus 7 Actn4 23 108 98 CCDS HistoryNCBI Gene:60595Re-query CCDS DB by CCDS ID:21061.1Re-query CCDS DB by GeneID:60595See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21061.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000068045.13 ENSMUSP00000066068.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000068045.13Link to Ensembl Protein Viewer:ENSMUSP00000066068.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000068045Re-query CCDS DB by Protein ID:ENSMUSP00000066068
Original member NCBI NM_021895.3 NP_068695.1 Updated not alive Link to Nucleotide Sequence:NM_021895.3Link to Protein Sequence:NP_068695.1Re-query CCDS DB by Nucleotide ID:NM_021895Re-query CCDS DB by Protein ID:NP_068695
Current member NCBI NM_021895.4 NP_068695.1 Accepted alive Link to Nucleotide Sequence:NM_021895.4Link to Protein Sequence:NP_068695.1Re-query CCDS DB by Nucleotide ID:NM_021895Re-query CCDS DB by Protein ID:NP_068695Link to BLAST:NP_068695.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_068695.1 912 P57780 912 100% 0 0

Chromosomal Locations for CCDS 21061.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 28894229 28894387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28894501 28894659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28895432 28895512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28896089 28896235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28896876 28897055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28897849 28897983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28898069 28898251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28898339 28898479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28898620 28898728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28901877 28902027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28904541 28904688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28905225 28905455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28906972 28907064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28911490 28911575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28912240 28912321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28913378 28913456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28915213 28915300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28916160 28916246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28918672 28918791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28918954 28919068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28962019 28962183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2739 nt):
ATGGTGGACTACCACGCAGCGAACCAGGCGTACCAGTACGGCCCGAACAGCGGCGGCGGCAATGGCGCGG
GTGGCGGCGGAAGCATGGGCGACTACATGGCCCAGGAGGATGACTGGGACCGGGACCTGCTGTTGGACCC
GGCCTGGGAGAAGCAGCAGCGCAAGACCTTCACAGCCTGGTGCAACTCTCATCTTCGGAAGGCTGGCACT
CAGATCGAGAATATCGATGAGGACTTCAGGGATGGGCTCAAACTTATGCTTCTGTTGGAGGTCATTTCAG
GGGAGCGTTTGCCTAAGCCAGAGCGGGGGAAGATGCGAGTGCACAAGATCAACAATGTAAACAAAGCCCT
GGACTTCATCGCCAGCAAGGGAGTCAAGCTGGTGTCCATCGGGGCAGAAGAGATTGTGGATGGCAATGCA
AAGATGACCCTGGGAATGATCTGGACCATCATCCTCAGATTTGCCATCCAGGACATCTCTGTGGAAGAGA
CCTCTGCTAAGGAAGGACTCCTCCTCTGGTGCCAGAGAAAGACAGCCCCATATAAAAACGTCAACGTCCA
GAACTTCCATATCAGCTGGAAGGACGGGCTGGCCTTCAATGCACTCATCCACCGGCACAGGCCTGAGCTG
ATTGAGTATGACAAGCTGCGGAAGGATGATCCAGTCACCAACCTAAACAATGCATTTGAAGTGGCTGAGA
AATACCTCGATATCCCCAAGATGTTGGATGCTGAGGACATCGTGAACACAGCCCGGCCCGACGAGAAGGC
CATAATGACATATGTGTCCAGCTTCTACCATGCCTTTTCAGGAGCGCAGAAGGCTGAGACCGCTGCCAAC
CGGATCTGCAAGGTGCTGGCTGTGAACCAGGAAAATGAGCACCTGATGGAAGACTATGAACGCCTGGCCA
GTGATCTTCTAGAGTGGATTCGGCGCACCATCCCCTGGCTGGAGGACCGGGTGCCTCAGAAGACCATCCA
GGAAATGCAGCAGAAGCTGGAGGACTTCCGAGACTATAGGCGTGTGCACAAGCCGCCCAAGGTGCAGGAG
AAGTGTCAGCTGGAGATCAACTTCAACACACTGCAGACCAAGCTGCGGCTCAGCAACCGGCCTGCCTTCA
TGCCCTCCGAGGGCAGGATGGTCTCCGACATCAACAATGGATGGCAGCACCTGGAGCAGGCTGAGAAGGG
CTATGAAGAATGGCTGCTGAATGAAATCCGTAGGCTGGAACGGCTTGACCACCTGGCAGAGAAGTTCCGG
CAGAAGGCTTCCATCCACGAGGCCTGGACTGATGGGAAGGAGGCCATGCTGAAGCAACGGGACTACGAGA
CAGCCACCCTGTCAGACATCAAAGCTCTGATCCGAAAACATGAGGCCTTTGAAAGTGACCTGGCTGCACA
CCAGGACCGAGTGGAGCAGATTGCTGCAATTGCTCAGGAGCTCAACGAGCTGGACTACTATGACTCCCAC
AACGTCAACACACGGTGCCAGAAGATCTGCGACCAGTGGGATAACCTGGGCTCTCTGACACACAGTCGCA
GGGAAGCCTTGGAGAAAACAGAGAAACAGCTAGAGACCATCGACCAGCTACATTTGGAGTATGCCAAGCG
GGCTGCACCCTTCAACAACTGGATGGAGAGTGCCATGGAGGACCTGCAGGACATGTTCATCGTCCACACC
ATCGAGGAGATCGAGGGCCTGATCTCAGCCCATGACCAGTTCAAGTCCACCCTGCCAGATGCTGACAGGG
AGCGTGAGGCCATCCTGGCCATCCACAAGGAGGCCCAGAGGATCGCTGAGAGCAATCACATCAAGCTGTC
GGGCAGCAATCCCTACACCACTGTTACCCCCCAGATCATCAACTCCAAGTGGGAGAAGGTGCAGCAGCTG
GTGCCAAAGAGGGACCATGCACTCCTGGAGGAGCAGAGCAAGCAGCAATCCAATGAGCACCTTCGCCGAC
AGTTCGCCAGCCAAGCCAATATGGTGGGGCCGTGGATCCAGACCAAGATGGAGGAGATCGGGCGCATCTC
CATTGAGATGAACGGGACTCTGGAAGACCAGCTGAGCCACCTGAAGCAGTACGAGCGCAGCATCGTGGAC
TACAAGCCCAGCCTGGACCTGCTGGAGCAGCAGCACCAGCTCATCCAGGAGGCCCTCATCTTCGACAACA
AGCACACCAACTACACAATGGAGCATATCCGTGTGGGCTGGGAGCAGCTGCTCACGACCATTGCCCGCAC
CATCAATGAGGTGGAAAACCAGATCCTCACCCGAGATGCCAAGGGTATCAGCCAGGAGCAGATGCAGGAG
TTCCGGGCATCCTTCAACCATTTTGACAAGGACCATGGCGGGGCACTGGGGCCTGAGGAATTCAAGGCCT
GCCTCATCAGCCTGGGCTATGACGTGGAGAATGACCGGCAGGGTGATGCTGAGTTCAACCGGATCATGAG
TGTGGTTGATCCCAACCATAGTGGCCTCGTGACCTTCCAAGCCTTCATTGACTTCATGTCAAGGGAGACC
ACAGACACAGACACAGCTGATCAGGTCATCGCCTCCTTCAAGGTCCTGGCAGGAGACAAGAACTTCATCA
CTGCTGAGGAACTGCGGAGAGAGCTGCCCCCCGACCAGGCCGAGTACTGCATCGCCCGCATGGCACCCTA
CCAGGGGCCTGATGCTGCTCCTGGCGCCCTTGACTACAAGTCCTTCTCCACAGCCCTCTATGGGGAGAGC
GACCTGTGA

Translation (912 aa):
MVDYHAANQAYQYGPNSGGGNGAGGGGSMGDYMAQEDDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGT
QIENIDEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDFIASKGVKLVSIGAEEIVDGNA
KMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFHISWKDGLAFNALIHRHRPEL
IEYDKLRKDDPVTNLNNAFEVAEKYLDIPKMLDAEDIVNTARPDEKAIMTYVSSFYHAFSGAQKAETAAN
RICKVLAVNQENEHLMEDYERLASDLLEWIRRTIPWLEDRVPQKTIQEMQQKLEDFRDYRRVHKPPKVQE
KCQLEINFNTLQTKLRLSNRPAFMPSEGRMVSDINNGWQHLEQAEKGYEEWLLNEIRRLERLDHLAEKFR
QKASIHEAWTDGKEAMLKQRDYETATLSDIKALIRKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSH
NVNTRCQKICDQWDNLGSLTHSRREALEKTEKQLETIDQLHLEYAKRAAPFNNWMESAMEDLQDMFIVHT
IEEIEGLISAHDQFKSTLPDADREREAILAIHKEAQRIAESNHIKLSGSNPYTTVTPQIINSKWEKVQQL
VPKRDHALLEEQSKQQSNEHLRRQFASQANMVGPWIQTKMEEIGRISIEMNGTLEDQLSHLKQYERSIVD
YKPSLDLLEQQHQLIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKGISQEQMQE
FRASFNHFDKDHGGALGPEEFKACLISLGYDVENDRQGDAEFNRIMSVVDPNHSGLVTFQAFIDFMSRET
TDTDTADQVIASFKVLAGDKNFITAEELRRELPPDQAEYCIARMAPYQGPDAAPGALDYKSFSTALYGES
DL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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