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Report for CCDS21334.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21334.1 Public Mus musculus 7 Mcee 23 108 98 CCDS HistoryNCBI Gene:73724Re-query CCDS DB by CCDS ID:21334.1Re-query CCDS DB by GeneID:73724See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21334.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000037205.10 ENSMUSP00000047855.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000037205.10Link to Ensembl Protein Viewer:ENSMUSP00000047855.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000037205Re-query CCDS DB by Protein ID:ENSMUSP00000047855
Original member Current member NCBI NM_028626.2 NP_082902.1 Accepted alive Link to Nucleotide Sequence:NM_028626.2Link to Protein Sequence:NP_082902.1Re-query CCDS DB by Nucleotide ID:NM_028626Re-query CCDS DB by Protein ID:NP_082902Link to BLAST:NP_082902.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_082902.1 178 Q9D1I5 178 100% 0 0

Chromosomal Locations for CCDS 21334.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 64392798 64392843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64400169 64400506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64411835 64411987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (537 nt):
ATGAGGCGTGTAGTGAAGGCCGCCGCGTTGGCTGCGGGCGCTACAGGGCTTTTCTCCAGAGTCCAAACTT
CA
GTTGCAATAGGGAGAAGTTTTTCCACACCACAGTCCCAGTTTCAAGAATCCAGTCCTGTGTGGAAGCT
G
GGTCGGCTCAATCACGTGGCTGTAGCAGTGCCAGATTTGGAAAAGGCCTCGTCATTTTACAGGGATGTT
CTA
GGGGCCCAGGTGAGTGAGGTGGTCCCTCTGCCGGAACATGGAGTATCTGTGGTTTTTGTCAACCTGG
GA
AATACCAAGATGGAACTGCTTCATCCACTGGGGAGTGATAGTCCAATCACAGGCTTTCTGCAGAAGAA
C
AAGGCTGGAGGAATGCATCACGTCTGCATCGAGGTGGACAACATCAGTGCAGCTGTGATGGATCTGAAG
AAG
AAGAAGATCCGTAGTCTGAGTGATGAGGCCAAAATAGGAGCACATGGGAAACCTGTGATTTTCCTCC
AT
CCCAAAGACTGTGGTGGGGTCCTTGTAGAACTGGAGCAAGCATGA


Translation (178 aa):
MRRVVKAAALAAGATGLFSRVQTSVAIGRSFSTPQSQFQESSPVWKLGRLNHVAVAVPDLEKASSFYRDV
L
GAQVSEVVPLPEHGVSVVFVNLGNTKMELLHPLGSDSPITGFLQKNKAGGMHHVCIE
VDNISAAVMDLK
K
KKIRSLSDEAKIGAHGKPVIFLHPKDCGGVLVELEQA




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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