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Report for CCDS22064.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22064.1 Public Mus musculus 8 Camsap3 23 108 98 CCDS HistoryNCBI Gene:69697Re-query CCDS DB by CCDS ID:22064.1Re-query CCDS DB by GeneID:69697See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22064.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000057028.14 ENSMUSP00000058958.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000057028.14Link to Ensembl Protein Viewer:ENSMUSP00000058958.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000057028Re-query CCDS DB by Protein ID:ENSMUSP00000058958
Original member Current member NCBI NM_027171.3 NP_081447.2 Accepted alive Link to Nucleotide Sequence:NM_027171.3Link to Protein Sequence:NP_081447.2Re-query CCDS DB by Nucleotide ID:NM_027171Re-query CCDS DB by Protein ID:NP_081447Link to BLAST:NP_081447.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081447.2 1252 Q80VC9-1 1252 100% 0 0

Chromosomal Locations for CCDS 22064.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 3587812 3587959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3597842 3598095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3598686 3598808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3598893 3598988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3600676 3600814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3601966 3602105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3602186 3602279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3602371 3602425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3602554 3602627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3603432 3603501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3603606 3605076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3606267 3606406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3606504 3606820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3607791 3607890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3608189 3608301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3608394 3608512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3608598 3608903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3759 nt):
ATGGTGGAAGCGGCGCCCGCAGGGTCCGGGCCACTGCGGAGGACTTTCCTGGTCCCCGAGATCAAGTCTT
TGGACCAGTACGATTTCTCTCGAGCCAAGGCGGCGGCGAGTCTGGCGTGGGTGCTGCGGGCCGCATTCGG
GGGAGCAGAGCATGTGCCTCCGGAGCTGTGGGAACCCTTCTACACCGATCAGTACGCACAGGAGCACGTG
AAGCCCCCAGTGACGCGGCTGCTGCTCTCTGCGGAACTATACTGTCGGGCCTGGCGCCAGGCACTGCCAC
AGCTCGAGCCATCCCCCAGTCCCTCTGCTCTGTTGGCCTTGCTGGCGAGGAGGGGCACGGTGCCTTCACT
GCCTGAGCACCCAGTGCGCGAGGCTGACCTGAAACACCAGCCAATTCTCATGGGAGCCCACCTAGCTGTC
ATCGATGCTCTCATGGTTGCCTTCTCATTTGAGTGGACAAAGACACTACCTGGTCCCTTGGCTCTGAGCA
GCTTGGAGCACAAACTCCTTTTCTGGGTAGACACAACTGTTCGGCGGCTGCAGGAGAAGACAGAACAAGA
AGCAGCCCAGCGTGCATCTCCTGCAGCCCCTCTGGATGGGGCCTCTCCTGCCCAGCCCTCGATTCGATAT
CGCAAGGACCGTGCCATTGCCCGAAGGGCTCCCTGCTTTCCAAATGTGACTACCCTTCAGGACCTGGCCA
GTGGGGCAGCACTGGCTGCCACCATCCACTGCTATTGTCCCCAGCTATTACGACTTGAGGAGGTGTGCCT
CAAGGACCCCATGTCTGTGGCAGACAGTCTATACAACCTCCAGCTGGTGCAAGACTTCTGTGCCTCCCAT
CTTCCTCGAGGCTGCCCCCTGTCCCTTGAAGACTTGCTGTATGTCCCACCACCCCTCAAGGTCAACCTGG
TGGTGCTGTTGGCTGAGATGTATATGTGCTTTGAGGTTCTGAAGCCTGATTTTGTGCAGGCCAAAGACTT
GCCTGATGGACATGCTGTCTCCCCCCGGAATACAGAGACTGTTCCATCTCAGAACAACAGTGGCAGCAGT
TCTCCTGTCTTCAACTTCCGTCACCCACTTCTGTCACCTGGTGGTCCCCAGTCTCCACTCCGAGGATCCA
CAGGCTCCCTGAAGTCCTCTCCATCAATGTCTCACATGGAGGCTCTTGGCAAAGCCTGGAACCGTCAGCT
TAGCCGTCCCCTCTCCCAGGCTGTGTCGTTCAGCACTCCCTTTGGCCTGGACAGCGATGTGGATGTCGTC
ATGGGAGATCCTGTCCTGCTCCGCTCCGTCAGCTCAGACAGTCTGGGTCCTCCACGTCCTGTGTCAACAT
CATCCCGGAATTCTGCTCAGCCAGCCCCAGAATCTGGAGACCTACCCACGATTGAAGAGGCCCTGCAGAT
CATTCACAGTGCTGAGCCCCGACTGCTCCCTGATGGGGCTGCTGATGGCAGTTTCTACCTCCATTCTCCT
GAGGGTCTCTCCAAACCACCACTCTCCCCCTACCCTCCCGAAGGAGCCTCAAAGCCGCTGTCTGATAGGC
TCAACAAGGCGCCTATCTATATATCACACCCTGAGAACCCTTCAAAATCATCTCCCTGCTCAACAGGAGA
GATACTGAAACCACCACCCCCATCCGAGGGTTCCCCCAAAGCTGTGGCTTCATCCCCAGCAGCCAACAAC
TCCGAAGTGAAGATGACCAGTTTTGCTGAACGCAAGAAACAGCTGGTGAAGGCTGAGGCTGAGTCAGGAT
TGGGGTCTCCAACATCCACCCCCGTAGCACCTGAGGCCTTGAGCTCAGAGATGAGTGAGCTGGGAGCCAG
GCTGGAGGAGAAGCGCCGAGCCATAGAGGCACAGAAACGACGCATTGAGGCAATCTTTGCCAAGCATAGG
CAGAGGCTGGGCAAGAGCGCTTTCCTGCAGGTGCAGCCTCGGGAGGCTGCAGGGGAGGCCGAGGAGGAAG
CTGAGCTGGGCTCAGTTCCTGGTGGGGAACGGCCAGCAGGTGAGGGCCAGGGTGAGCCGTCCTTACGGCA
CAAGTCAGTTACCTTCTCTCCAGACCTGGGCCCAGTGCCCCCAGAGGGACTTGGGGATTACAATAGAGCA
GTCAGTAAGCTGAGTGCCGCTCTGAGCTCTCTGCAGCGGGACATGCAGAGGCTCACAGACCAGCAACAGC
GGCTTCTAGCCCCTCCAGAAGCTCCTGGACCTGCCCCACCACCTGCAGCCTGGGTCATTCCTGGACCCGC
CACTGGGCCTAAAGCAGCATCCCCCAGCCCTGCCCGTCGTGCCCCAGCTGCCCGACGCAGCCCTGGGCCA
GGCCCCAGCCCAACACCCCGTAGTCCAAAACATGCAAGGCCGGCAGAGCTGAAGCTTGCACCTTTGACAA
GGGTACTCACACCACCCCATGATGTAGACAGCCTCCCTCACCTACGCAAGTTTTCACCCAGCCAGGTGCC
TGTACAGACTCGCTCCTCTATCCTCCTGTCGGAGGGGACACCTCCCGAGGAGCCCACCACCAAGCCTGCC
CTCATTGAGATCCCTCTAGCCAGCCTGGGGGAGCCTGCTGCTGATGAGGAAGGAGATGGGAGCCCCCCTG
GGGCTGAGGATTCCTTAGAGGAAGAGGCATCTTCTGAGGGAGAGCCCCGATCAGGGCTTGGATTCTTTTA
TAAGGACGAAGACAAGCCTGAGGATGAGATGGCTCAGAAGCGAGCTAGCCTGCTGGAGCGTCAGCAGAGG
CGGGTAGAGGAAGCCCGGCGGCGCAAACAGTGGCAGGAGGCAGAGAAGGAGCAGAAACGGGAGGAGGCCG
CCAGGCTGGCTCAGGAGGCTCCAGGCTTGGCCTTTACAACTCCTGTTGTAGCCTCTGCGGCTCCAGTGGC
CACCTTGGCTCCTACTACCAGAGCCATGGCCCCAGCTGAGGAGGAGGTGGGCCCCCGGCGGGGGGACTTC
ACAAGACTTGAGTATGAACGCCGGGCACAACTGAAACTGATGGATGACCTTGATAAGGTGCTACGGCCCC
GGGCCTCAGGGACCGGGGGACCAGGGCGGGGCGGGCGCAGGGCCACCCGGCCACGCTCTGGTTGCTGTGA
TGACTCGGCCTTGGCACGAAGCCCAGCCCGCGGCCTGCTGGGTTCACGGCTCAGCAAGGTCTATTCCCAG
TCCACGCTGTCCCTATCTACGGTGGCCAACGAGGCTCCCAATAACCTTGGTGTGAAGAGGCCCACCTCTC
GGGCCCCTTCTCCATCAGGCCTCATGTCTCCAAGCCGCCTGCCTGGCAGTCGAGAACGTGACTGGGAGAA
TGGAAGCAATGCATCCTCCCCAGCATCAGTGCCTGAGTACACAGGTCCCCGGCTATACAAGGAACCCAGC
GCCAAGTCTAACAAGTTTATCATCCACAATGCCTTGTCACACTGCTGCCTGGCAGGCAAGGTGAATGAGC
CCCAGAAGAACAGAATTCTAGAGGAAATCGAGAAAAGCAAGGCCAACCACTTCCTGATTCTCTTTCGGGA
CTCAAGCTGCCAGTTCCGGGCCCTCTACACTCTGTCTGGGGAGACAGAGGAGCTATCGAGGCTGGCAGGC
TATGGGCCTCGGACCGTCACTCCTGCCATGGTCGAAGGCATCTATAAGTACAACTCGGATCGCAAACGGT
TCACCCAGATCCCTGCTAAAACCATGTCTATGAGTGTAGACGCCTTCACTATCCAGGGACACCTTTGGCA
AAGCAAGAAGCCCACCACGCCCAAGAAGGGTGGCGGTACCCCCAAATAG

Translation (1252 aa):
MVEAAPAGSGPLRRTFLVPEIKSLDQYDFSRAKAAASLAWVLRAAFGGAEHVPPELWEPFYTDQYAQEHV
KPPVTRLLLSAELYCRAWRQALPQLEPSPSPSALLALLARRGTVPSLPEHPVREADLKHQPILMGAHLAV
IDALMVAFSFEWTKTLPGPLALSSLEHKLLFWVDTTVRRLQEKTEQEAAQRASPAAPLDGASPAQPSIRY
RKDRAIARRAPCFPNVTTLQDLASGAALAATIHCYCPQLLRLEEVCLKDPMSVADSLYNLQLVQDFCASH
LPRGCPLSLEDLLYVPPPLKVNLVVLLAEMYMCFEVLKPDFVQAKDLPDGHAVSPRNTETVPSQNNSGSS
SPVFNFRHPLLSPGGPQSPLRGSTGSLKSSPSMSHMEALGKAWNRQLSRPLSQAVSFSTPFGLDSDVDVV
MGDPVLLRSVSSDSLGPPRPVSTSSRNSAQPAPESGDLPTIEEALQIIHSAEPRLLPDGAADGSFYLHSP
EGLSKPPLSPYPPEGASKPLSDRLNKAPIYISHPENPSKSSPCSTGEILKPPPPSEGSPKAVASSPAANN
SEVKMTSFAERKKQLVKAEAESGLGSPTSTPVAPEALSSEMSELGARLEEKRRAIEAQKRRIEAIFAKHR
QRLGKSAFLQVQPREAAGEAEEEAELGSVPGGERPAGEGQGEPSLRHKSVTFSPDLGPVPPEGLGDYNRA
VSKLSAALSSLQRDMQRLTDQQQRLLAPPEAPGPAPPPAAWVIPGPATGPKAASPSPARRAPAARRSPGP
GPSPTPRSPKHARPAELKLAPLTRVLTPPHDVDSLPHLRKFSPSQVPVQTRSSILLSEGTPPEEPTTKPA
LIEIPLASLGEPAADEEGDGSPPGAEDSLEEEASSEGEPRSGLGFFYKDEDKPEDEMAQKRASLLERQQR
RVEEARRRKQWQEAEKEQKREEAARLAQEAPGLAFTTPVVASAAPVATLAPTTRAMAPAEEEVGPRRGDF
TRLEYERRAQLKLMDDLDKVLRPRASGTGGPGRGGRRATRPRSGCCDDSALARSPARGLLGSRLSKVYSQ
STLSLSTVANEAPNNLGVKRPTSRAPSPSGLMSPSRLPGSRERDWENGSNASSPASVPEYTGPRLYKEPS
AKSNKFIIHNALSHCCLAGKVNEPQKNRILEEIEKSKANHFLILFRDSSCQFRALYTLSGETEELSRLAG
YGPRTVTPAMVEGIYKYNSDRKRFTQIPAKTMSMSVDAFTIQGHLWQSKKPTTPKKGGGTPK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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