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Report for CCDS22168.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22168.1 Public Mus musculus 8 Atp7b 23 108 98 CCDS HistoryNCBI Gene:11979Re-query CCDS DB by CCDS ID:22168.1Re-query CCDS DB by GeneID:11979See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22168.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000006742.10 ENSMUSP00000006742.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000006742.10Link to Ensembl Protein Viewer:ENSMUSP00000006742.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000006742Re-query CCDS DB by Protein ID:ENSMUSP00000006742
Original member NCBI NM_007511.2 NP_031537.2 Updated not alive Link to Nucleotide Sequence:NM_007511.2Link to Protein Sequence:NP_031537.2Re-query CCDS DB by Nucleotide ID:NM_007511Re-query CCDS DB by Protein ID:NP_031537
Current member NCBI NM_007511.3 NP_031537.2 Accepted alive Link to Nucleotide Sequence:NM_007511.3Link to Protein Sequence:NP_031537.2Re-query CCDS DB by Nucleotide ID:NM_007511Re-query CCDS DB by Protein ID:NP_031537Link to BLAST:NP_031537.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031537.2 1462 Q64446 1462 100% 0 0

Chromosomal Locations for CCDS 22168.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 21994651 21994924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 21995554 21995656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 21997286 21997403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 21997483 21997686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 21998225 21998367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22000049 22000192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22002708 22002861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22004193 22004375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22006260 22006454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22011015 22011149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22011505 22011659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22011765 22011892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22012711 22012802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22013376 22013609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22014513 22014687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22015878 22015954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22018049 22018210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22020761 22020924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22022297 22022554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22027530 22028736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22059972 22060055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4389 nt):
ATGGATCCCAGGAAGAACTTGGCGTCTGTGGGGACGATGCCTGAACAGGAGAGACAGGTCACAGCCAAAG
AGGCCAGTCGGAAAATCTTATCTAAACTTGCTTTGCCCGGCCGGCCCTGGGAGCAATCAATGAAGCAGAG
CTTCGCCTTCGACAATGTTGGCTACGAAGGGGGTCTGGACAGCACCAGCTCGTCCCCAGCAGCCACTGAT
GTGGTTAACATCCTGGGCATGACTTGTCATTCTTGCGTCAAGTCCATTGAGGACAGGATCTCCAGTCTGA
AAGGCATTGTGAACATCAAGGTGTCCCTGGAACAAGGCAGCGCCACTGTCAGATATGTGCCGTCTGTCAT
GAACCTGCAGCAGATTTGCCTTCAGATTGAGGATATGGGCTTTGAGGCCAGCGCTGCAGAGGGAAAGGCC
GCCTCCTGGCCTTCCAGGTCCTCCCCAGCCCAGGAGGCGGTGGTCAAGCTCCGGGTAGAGGGCATGACCT
GTCAGTCCTGTGTCAGCTCTATCGAGGGCAAGATCCGGAAACTGCAAGGGGTTGTGAGAATCAAAGTCTC
CCTAAGCAACCAAGAGGCAGTCATTACCTATCAGCCTTACCTCATTCAACCCGAAGACCTCAGGGACCAC
ATCTGTGACATGGGATTTGAAGCTGCCATCAAGAACAGAACAGCTCCCTTAAGGCTGGGACCAATTGATG
TCAACAAGTTAGAAAGCACTAACCTAAAGAAAGAGACGGTCTCTCCTGTCCAGATTTCCAATCATTTTGA
GACCCTGGGGCACCAGGGGAGCTACCTGGCCACCCTCCCACTAAGAATAGACGGCATGCACTGTAAATCA
TGTGTTTTGAATATTGAAGGAAATATAGGCCAACTCCCGGGGGTTCAAAATATTCACGTGTCCTTGGAGA
ACAAAACCGCCCAAATACAGTATGACCCTTCTTGTGTCACCCCCATGTTCCTGCAGACAGCCATCGAGGC
ACTACCACCTGGGCACTTTAAAGTGTCTCTTCCCGATGGAGTAGAGGAGAATGAGCCCCAAAGTGGCTCC
TCCCAGAGACACCAGGAGCAGGGCCCGGGCAGGACTGCGGTGCTCACCATCAGCGGCATTACCTGTGCCT
CATCTGTTCAGCCTATCGAAGACATGCTGTCCCAGAGGAAAGGTGTGCAGCAAACATCCATCTCTTTGGC
AGAAGGGACTGGAGCAGTTCTTTACGACCCCTCCATAGTCAGCTTGGACGAACTCCGAACGGCTGTAGAA
GACATGGGATTTGAGGTGTCTGTGAATTCTGAAACCTTCACTATTAACCCTGTCAGAAACTTCAAATCTG
GGAATTCTGTGCCACAAACCATGGGTGATATAGCAGGGTCTGTGCAAAAAATGGCTCCCGACACTAGAGG
GCTCCCCACACACCAAGGTCCTGGCCACTCTTCAGAGACCCCATCATCCCCGGGAGCAACAGCATCACAG
AAGTGCTTCGTACAGATCAAAGGCATGACCTGTGCGTCCTGTGTGTCTAACATAGAAAGGAGTCTCCAGA
GACATGCTGGTATTCTCTCAGTGTTGGTCGCCTTGATGTCGGGAAAGGCAGAGGTCAAGTATGATCCGGA
GATCATCCAGTCGCCCAGGATAGCTCAGCTCATCCAGGACCTGGGCTTCGAAGCGTCAGTCATGGAGGAC
AACACAGTCTCTGAAGGTGACATCGAACTGATTATCACAGGGATGACCTGTGCTTCCTGTGTCCACAACA
TAGAGTCCAAGCTCACAAGGACAAATGGCATCACTTACGCCTCTGTGGCCCTTGCCACCAGCAAAGCCCA
TGTGAAGTTCGATCCTGAAATTGTTGGTCCCCGTGACATCATCAAGATCATTGAGGAAATTGGCTTTCAT
GCTTCCCTGGCCCAGAGAAACCCCAACGCCCATCACTTGGACCACAAGACGGAAATAAAACAGTGGAAGA
AGTCTTTCCTGTGCAGCCTGGTGTTCGGCATCCCCGTCATGGGATTGATGGTCTACATGTTAATCCCCAG
CAGTACGCCTCAGGAGACGATGGTCCTGGACCACAACATCATCCCAGGACTGTCCGTTCTCAATCTCATC
TTCTTCATCTTGTGTACCTTTGTCCAATTTCTGGGTGGGTGGTACTTCTACGTACAAGCCTACAAATCGC
TGAGACACAGGTCCGCCAACATGGACGTACTCATCGTGCTCGCCACAACCATTGCCTATGCCTACTCCCT
GGTCATCCTGGTGGTCGCCGTAGCCGAGAAGGCAGAGAAGAGCCCCGTGACCTTCTTTGACACGCCCCCC
ATGCTCTTTGTGTTCATCGCCCTGGGACGGTGGCTGGAACACGTGGCCAAGAGCAAAACTTCAGAAGCCC
TTGCAAAACTCATGTCACTCCAAGCCACAGAAGCCACAGTCGTGACCCTGGGTGAGGACAACTTAATCCT
CAGAGAGGAGCAGGTGCCCATGGAGCTGGTGCAGCGAGGCGACGTCATCAAGGTTGTCCCTGGGGGCAAG
TTCCCAGTGGATGGGAAAGTCCTCGAAGGCAATACCATGGCTGATGAGTCCCTCATCACAGGAGAGGCCA
TGCCTGTCACTAAGAAACCTGGGAGCATAGTGATTGCTGGCTCTATTAATGCTCATGGCTCTGTGCTCCT
TAAAGCTACCCATGTGGGTAATGACACAACTTTGGCTCAGATTGTAAAGTTGGTGGAAGAGGCCCAGATG
TCAAAGGCTCCCATTCAGCAGCTGGCTGACCGGTTCAGTGGATATTTTGTCCCATTCATCATCATCATTT
CAACCTTGACCCTGGTGGTGTGGATCGTCATTGGCTTTGTCGATTTCGGTGTGGTTCAGAAGTACTTTCC
TAGCCCTAGCAAGCACATCTCGCAGACAGAGGTGATCATCCGCTTTGCCTTCCAGACGTCCATCACTGTG
CTGTGCATCGCCTGCCCCTGCTCCCTGGGGCTGGCCACACCCACAGCAGTCATGGTGGGCACTGGGGTGG
CTGCCCAGAACGGTGTCCTAATCAAAGGAGGGAAGCCTCTGGAGATGGCACACAAGATAAAGACCGTTAT
GTTTGACAAAACGGGCACCATCACCCACGGGGTCCCCAGAGTCATGCGGTTCCTGCTGCTCGCAGACGTG
GCCACACTCCCCCTCAGGAAGGTTCTGGCCGTGGTGGGCACCGCGGAGGCCAGCAGCGAGCACCCCTTAG
GCGTGGCCGTCACTAAATACTGCAAAGAGGAACTTGGGACGGAGACCCTGGGATACAGCACAGACTTCCA
GGCAGTGCCCGGCTGTGGAATTAGCTGCAAAGTTAGCAACGTGGAGGGCATCCTGGCTCGCAGTGATCTG
ACTGCTCACCCTGTTGGAGTTGGCAACCCTCCCACAGGGGAAGGTGCAGGTCCCCAGACCTTCTCCGTGC
TGATTGGAAACCGGGAATGGATGCGGCGAAACGGTTTAACCATCTCCAGTGACATCAGTGACGCCATGAC
AGATCACGAGATGAAAGGACAGACGGCCATCCTGGTGGCCATTGATGGTGTGCTCTGCGGGATGATCGCC
ATCGCAGATGCTGTCAAACCAGAGGCTGCCCTGGCTATCTACACCCTGAAAAGCATGGGTGTGGATGTGG
CTCTGATCACAGGGGACAACCGGAAGACAGCCAGAGCCATTGCTACTCAGGTTGGCATCAACAAAGTCTT
TGCGGAGGTACTGCCTTCTCACAAGGTGGCCAAGGTCCAGGAGCTTCAGAATGAAGGGAAGAAAGTCGCC
ATGGTGGGAGATGGGGTGAATGACTCCCCAGCCCTGGCCCAGGCTGACGTGGGCATCGCCATCGGGACTG
GCACAGATGTTGCCATCGAAGCAGCAGACGTGGTCCTGATCAGAAATGACTTATTGGACGTCGTGGCCAG
CATTCATCTCTCCAAGAGGACCGTCCGGAGGATCCGGGTCAATCTGGTGCTGGCATTGATTTATAACATG
GTTGGGATACCTATTGCTGCAGGTGTCTTCATGCCCATTGGCATCGTGCTGCAGCCGTGGATGGGCTCAG
CAGCCATGGCTGCGTCCTCTGTCTCTGTGGTGCTCTCGTCTCTTCAGCTCAAGTGCTATAGAAAGCCCGA
CCTAGAGAGATATGAGGCCCAGGCCCACGGCCGCATGAAGCCCCTGAGTGCCTCCCAAGTCAGCGTGCAC
ATTGGCATGGATGACCGGCGTCGGGATTCTCCCAGGGCCACCGCGTGGGACCAGGTCAGCTACGTGAGCC
AAGTGTCTCTGTCCTCCCTGACGTCAGACAGATTGTCTCGGCATGGCGGGGCAGCAGAGGACGGTGGCGA
CAAATGGTCCCTGCTCCTGAGTGACAGGGATGAAGAGCAGTGCATCTGA

Translation (1462 aa):
MDPRKNLASVGTMPEQERQVTAKEASRKILSKLALPGRPWEQSMKQSFAFDNVGYEGGLDSTSSSPAATD
VVNILGMTCHSCVKSIEDRISSLKGIVNIKVSLEQGSATVRYVPSVMNLQQICLQIEDMGFEASAAEGKA
ASWPSRSSPAQEAVVKLRVEGMTCQSCVSSIEGKIRKLQGVVRIKVSLSNQEAVITYQPYLIQPEDLRDH
ICDMGFEAAIKNRTAPLRLGPIDVNKLESTNLKKETVSPVQISNHFETLGHQGSYLATLPLRIDGMHCKS
CVLNIEGNIGQLPGVQNIHVSLENKTAQIQYDPSCVTPMFLQTAIEALPPGHFKVSLPDGVEENEPQSGS
SQRHQEQGPGRTAVLTISGITCASSVQPIEDMLSQRKGVQQTSISLAEGTGAVLYDPSIVSLDELRTAVE
DMGFEVSVNSETFTINPVRNFKSGNSVPQTMGDIAGSVQKMAPDTRGLPTHQGPGHSSETPSSPGATASQ
KCFVQIKGMTCASCVSNIERSLQRHAGILSVLVALMSGKAEVKYDPEIIQSPRIAQLIQDLGFEASVMED
NTVSEGDIELIITGMTCASCVHNIESKLTRTNGITYASVALATSKAHVKFDPEIVGPRDIIKIIEEIGFH
ASLAQRNPNAHHLDHKTEIKQWKKSFLCSLVFGIPVMGLMVYMLIPSSTPQETMVLDHNIIPGLSVLNLI
FFILCTFVQFLGGWYFYVQAYKSLRHRSANMDVLIVLATTIAYAYSLVILVVAVAEKAEKSPVTFFDTPP
MLFVFIALGRWLEHVAKSKTSEALAKLMSLQATEATVVTLGEDNLILREEQVPMELVQRGDVIKVVPGGK
FPVDGKVLEGNTMADESLITGEAMPVTKKPGSIVIAGSINAHGSVLLKATHVGNDTTLAQIVKLVEEAQM
SKAPIQQLADRFSGYFVPFIIIISTLTLVVWIVIGFVDFGVVQKYFPSPSKHISQTEVIIRFAFQTSITV
LCIACPCSLGLATPTAVMVGTGVAAQNGVLIKGGKPLEMAHKIKTVMFDKTGTITHGVPRVMRFLLLADV
ATLPLRKVLAVVGTAEASSEHPLGVAVTKYCKEELGTETLGYSTDFQAVPGCGISCKVSNVEGILARSDL
TAHPVGVGNPPTGEGAGPQTFSVLIGNREWMRRNGLTISSDISDAMTDHEMKGQTAILVAIDGVLCGMIA
IADAVKPEAALAIYTLKSMGVDVALITGDNRKTARAIATQVGINKVFAEVLPSHKVAKVQELQNEGKKVA
MVGDGVNDSPALAQADVGIAIGTGTDVAIEAADVVLIRNDLLDVVASIHLSKRTVRRIRVNLVLALIYNM
VGIPIAAGVFMPIGIVLQPWMGSAAMAASSVSVVLSSLQLKCYRKPDLERYEAQAHGRMKPLSASQVSVH
IGMDDRRRDSPRATAWDQVSYVSQVSLSSLTSDRLSRHGGAAEDGGDKWSLLLSDRDEEQCI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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