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Report for CCDS2231.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2231.1 Public Homo sapiens 2 DHRS9 24 110 108 CCDS HistoryNCBI Gene:10170Re-query CCDS DB by CCDS ID:2231.1Re-query CCDS DB by GeneID:10170See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2231.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357546.6 ENSP00000350154.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000357546.6Link to Ensembl Protein Viewer:ENSP00000350154.2Re-query CCDS DB by Nucleotide ID:ENST00000357546Re-query CCDS DB by Protein ID:ENSP00000350154
Original member Current member EBI ENST00000428522.5 ENSP00000388564.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000428522.5Link to Ensembl Protein Viewer:ENSP00000388564.1Re-query CCDS DB by Nucleotide ID:ENST00000428522Re-query CCDS DB by Protein ID:ENSP00000388564
Original member Current member EBI ENST00000436483.6 ENSP00000407167.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000436483.6Link to Ensembl Protein Viewer:ENSP00000407167.2Re-query CCDS DB by Nucleotide ID:ENST00000436483Re-query CCDS DB by Protein ID:ENSP00000407167
Original member Current member EBI ENST00000412271.1 ENSP00000407747.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000412271.1Link to Ensembl Protein Viewer:ENSP00000407747.1Re-query CCDS DB by Nucleotide ID:ENST00000412271Re-query CCDS DB by Protein ID:ENSP00000407747
Original member Current member EBI ENST00000602501.5 ENSP00000473337.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000602501.5Link to Ensembl Protein Viewer:ENSP00000473337.1Re-query CCDS DB by Nucleotide ID:ENST00000602501Re-query CCDS DB by Protein ID:ENSP00000473337
Original member Current member EBI ENST00000674881.1 ENSP00000502399.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000674881.1Link to Ensembl Protein Viewer:ENSP00000502399.1Re-query CCDS DB by Nucleotide ID:ENST00000674881Re-query CCDS DB by Protein ID:ENSP00000502399
Original member Current member NCBI NM_001142270.2 NP_001135742.1 Accepted alive Link to Nucleotide Sequence:NM_001142270.2Link to Protein Sequence:NP_001135742.1Re-query CCDS DB by Nucleotide ID:NM_001142270Re-query CCDS DB by Protein ID:NP_001135742Link to BLAST:NP_001135742.1
Original member Current member NCBI NM_001142271.2 NP_001135743.1 Accepted alive Link to Nucleotide Sequence:NM_001142271.2Link to Protein Sequence:NP_001135743.1Re-query CCDS DB by Nucleotide ID:NM_001142271Re-query CCDS DB by Protein ID:NP_001135743Link to BLAST:NP_001135743.1
Original member Current member NCBI NM_001376924.1 NP_001363853.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001376924.1Link to Protein Sequence:NP_001363853.1Re-query CCDS DB by Nucleotide ID:NM_001376924Re-query CCDS DB by Protein ID:NP_001363853Link to BLAST:NP_001363853.1
Original member Current member NCBI NM_199204.2 NP_954674.1 Accepted alive Link to Nucleotide Sequence:NM_199204.2Link to Protein Sequence:NP_954674.1Re-query CCDS DB by Nucleotide ID:NM_199204Re-query CCDS DB by Protein ID:NP_954674Link to BLAST:NP_954674.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001135742.1 319 Q9BPW9-1 319 100% 0 0
NP_001135743.1 319 Q9BPW9-1 319 100% 0 0
NP_001363853.1 319 Q9BPW9-1 319 100% 0 0
NP_954674.1 319 Q9BPW9-1 319 100% 0 0

Chromosomal Locations for CCDS 2231.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 169081582 169081894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169083329 169083587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169091790 169091953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169095544 169095767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (960 nt):
ATGCTCTTTTGGGTGCTAGGCCTCCTAATCCTCTGTGGTTTTCTGTGGACTCGTAAAGGAAAACTAAAGA
TTGAAGACATCACTGATAAGTACATTTTTATCACTGGATGTGACTCGGGCTTTGGAAACTTGGCAGCCAG
AACTTTTGATAAAAAGGGATTTCATGTAATCGCTGCCTGTCTGACTGAATCAGGATCAACAGCTTTAAAG
GCAGAAACCTCAGAGAGACTTCGTACTGTGCTTCTGGATGTGACCGACCCAGAGAATGTCAAGAGGACTG
CCCAGTGGGTGAAGAACCAAGTTGGGGAGAAAGGTCTCTGGGGTCTGATCAATAATGCTGGTGTTCCCGG
CGTGCTGGCTCCCACTGACTGGCTGACACTAGAGGACTACAGAGAACCTATTGAAGTGAACCTGTTTGGA
CTCATCAGTGTGACACTAAATATGCTTCCTTTGGTCAAGAAAGCTCAAGGGAGAGTTATTAATGTCTCCA
GTGTTGGAGGTCGCCTTGCAATCGTTGGAGGGGGCTATACTCCATCCAAATATGCAGTGGAAGGTTTCAA
TGACAGCTTAAGACGGGACATGAAAGCTTTTGGTGTGCACGTCTCATGCATTGAACCAGGATTGTTCAAA
ACAAACTTGGCAGATCCAGTAAAGGTAATTGAAAAAAAACTCGCCATTTGGGAGCAGCTGTCTCCAGACA
TCAAACAACAATATGGAGAAGGTTACATTGAAAAAAGTCTAGACAAACTGAAAGGCAATAAATCCTATGT
GAACATGGACCTCTCTCCGGTGGTAGAGTGCATGGACCACGCTCTAACAAGTCTCTTCCCTAAGACTCAT
TATGCCGCTGGAAAAGATGCCAAAATTTTCTGGATACCTCTGTCTCACATGCCAGCAGCTTTGCAAGACT
TTTTATTGTTGAAACAGAAAGCAGAGCTGGCTAATCCCAAGGCAGTGTGA

Translation (319 aa):
MLFWVLGLLILCGFLWTRKGKLKIEDITDKYIFITGCDSGFGNLAARTFDKKGFHVIAACLTESGSTALK
AETSERLRTVLLDVTDPENVKRTAQWVKNQVGEKGLWGLINNAGVPGVLAPTDWLTLEDYREPIEVNLFG
LISVTLNMLPLVKKAQGRVINVSSVGGRLAIVGGGYTPSKYAVEGFNDSLRRDMKAFGVHVSCIEPGLFK
TNLADPVKVIEKKLAIWEQLSPDIKQQYGEGYIEKSLDKLKGNKSYVNMDLSPVVECMDHALTSLFPKTH
YAAGKDAKIFWIPLSHMPAALQDFLLLKQKAELANPKAV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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