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Report for CCDS22552.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22552.1 Public Mus musculus 8 Adgrg5 23 108 98 CCDS HistoryNCBI Gene:382045Re-query CCDS DB by CCDS ID:22552.1Re-query CCDS DB by GeneID:382045See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22552.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000074570.9 ENSMUSP00000074155.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000074570.9Link to Ensembl Protein Viewer:ENSMUSP00000074155.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000074570Re-query CCDS DB by Protein ID:ENSMUSP00000074155
Original member Current member NCBI NM_001033468.3 NP_001028640.2 Accepted alive Link to Nucleotide Sequence:NM_001033468.3Link to Protein Sequence:NP_001028640.2Re-query CCDS DB by Nucleotide ID:NM_001033468Re-query CCDS DB by Protein ID:NP_001028640Link to BLAST:NP_001028640.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001028640.2 523 Q3V3Z3-2 523 100% 0 0

Chromosomal Locations for CCDS 22552.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 94933366 94933429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94933496 94933571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94933875 94934031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94934461 94934580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94935050 94935166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94936360 94936512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94937224 94937342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94937573 94937841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94938541 94938658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94941505 94941782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94942032 94942132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1572 nt):
ATGGATCCACACGGCGCCCTTTTCTTCTACCTGTGCCTTCTGGCTGCTCAAGTTGTCCTAGTAGAAACCC
TGTCAGACCTACTTGTCTTGATGAAGCGCCTTGAGCAGCCCGTAGGCCGGGGCTTGTCTTCCAGAGCGAG
GCATATCCACAGCCTGGAGCAGAAGCTGCTCAATGCCAGCTTCGGCGGGCACAACTTGACCTTGCAGACA
AACTCCATCCAGTCTCTTGTCTTCAAGCTGAGCTGCGACTTTCCTGGTCTTTCCCTGTCCAGCACCACAC
TGACAAATGTCTCCCAGGTGCGAGCCCCACATGCCATGCAATTCCCTGCTGAGCTGACCAAGGGTGCCTG
TGTGACCTCCCGGCCTGCTGAGCTTCGACTCATCTGCATCTATTTCTTCACTGCACACCTCTTTCAGGAT
GACCGGAACTCATCACTGCTCAATAACTATGTCCTGGGGGCCCAGCTGGATCACAGGCCTGTGAACAACC
TTCAGAAGCCAGTCAACATCAGCTTCTGGCATAATCGGAGTCTGGAAGGGTATACAGTATCCTGTGTTTT
CTGGAAGGAGGGAGCCAGCAAGAGCAGCTGGGGGGCCTGGAGCCCTGAGGGCTGTTATACAGAGCAGCCC
TCAGCCACCCAGGTTCTCTGCCATTGCAACCATCTCACCTACTTCGCTGTGCTTATGCTCTCTGGAGACC
CCGTGCCCGCTGAGCTGCAGGTGCCTCTTGAGTACATCTCCTTTGTGGGTTGCAGCATCTCCATCGTGGC
CTCGCTGCTCACCATACTGCTGTACGCTCAGTCCAGGAAGCAAAGCGATTCCACCACACGTATCCACATG
AACCTGAATGGCTCTGTTCTGCTCCTGAACGTCACCTTCCTTCTGAGCTCCCAGATGACCCTGCCCACCA
TGCCCAGGCCCGTCTGCAAGGTGCTGGCTGCTGTCCTACACTACGCACTGCTCAGCAGCCTTACCTGGAT
GGCCATCGAAGGCTTCAACCTCTACCTTTTCCTGGGGCGTGTCTACAACGCCTACATTCGCCGATACTTG
CTCAAGCTCTGCATGCTGGGCTGGGGGTTTCCAGCCCTCTTGGTGCTGCTGCTTCTGATGATCAAGAGCT
CAGTGTATGGACCCTGTGTGACCTCACTCTCCAAAAGCCAGGAAAATGGCACAGGCTTCCAGAATGTGTC
CATGTGCTGGATCCGAAGTCCCATGGTACACAGCATCCTGGTCATGGGCTATGGTGGCTTCACATCTCTG
TTCAACCTGGTGGTGCTGGCCTGGGCTCTGTGGATCTTGTGCAGGCTTCGGGCACGGGAGAAGGCACTGA
GTCCCTGGGCCTACCGGGACACTGCCATGGTGTTGGGTCTCACTGTGCTGCTTGGCACCACCTGGACCCT
AGCCTTCTTCTCCTTCGGTGTGTTCCTGCTGCCTCAGCTCTTCCTCTTTACCATCTTCAACTCGCTCTAT
GGTTTCTTCCTCTTCCTGTGGTTCTGCTCACAAAAGCGTTACTCGGATGCCGAAGCCAAGGCGGAGATGG
AGGCAGTCAGCTCCTCCCAGATGACACACTGA

Translation (523 aa):
MDPHGALFFYLCLLAAQVVLVETLSDLLVLMKRLEQPVGRGLSSRARHIHSLEQKLLNASFGGHNLTLQT
NSIQSLVFKLSCDFPGLSLSSTTLTNVSQVRAPHAMQFPAELTKGACVTSRPAELRLICIYFFTAHLFQD
DRNSSLLNNYVLGAQLDHRPVNNLQKPVNISFWHNRSLEGYTVSCVFWKEGASKSSWGAWSPEGCYTEQP
SATQVLCHCNHLTYFAVLMLSGDPVPAELQVPLEYISFVGCSISIVASLLTILLYAQSRKQSDSTTRIHM
NLNGSVLLLNVTFLLSSQMTLPTMPRPVCKVLAAVLHYALLSSLTWMAIEGFNLYLFLGRVYNAYIRRYL
LKLCMLGWGFPALLVLLLLMIKSSVYGPCVTSLSKSQENGTGFQNVSMCWIRSPMVHSILVMGYGGFTSL
FNLVVLAWALWILCRLRAREKALSPWAYRDTAMVLGLTVLLGTTWTLAFFSFGVFLLPQLFLFTIFNSLY
GFFLFLWFCSQKRYSDAEAKAEMEAVSSSQMTH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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