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Report for CCDS2371.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2371.1 Public Homo sapiens 2 FASTKD2 24 110 108 CCDS HistoryNCBI Gene:22868Re-query CCDS DB by CCDS ID:2371.1Re-query CCDS DB by GeneID:22868See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2371.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000236980.10 ENSP00000236980.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000236980.10Link to Ensembl Protein Viewer:ENSP00000236980.6Re-query CCDS DB by Nucleotide ID:ENST00000236980Re-query CCDS DB by Protein ID:ENSP00000236980
Original member Current member EBI ENST00000403094.3 ENSP00000384929.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000403094.3Link to Ensembl Protein Viewer:ENSP00000384929.3Re-query CCDS DB by Nucleotide ID:ENST00000403094Re-query CCDS DB by Protein ID:ENSP00000384929
Original member Current member EBI ENST00000402774.8 ENSP00000385990.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000402774.8Link to Ensembl Protein Viewer:ENSP00000385990.3Re-query CCDS DB by Nucleotide ID:ENST00000402774Re-query CCDS DB by Protein ID:ENSP00000385990
Original member Current member NCBI NM_001136193.2 NP_001129665.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001136193.2Link to Protein Sequence:NP_001129665.1Re-query CCDS DB by Nucleotide ID:NM_001136193Re-query CCDS DB by Protein ID:NP_001129665Link to BLAST:NP_001129665.1
Original member Current member NCBI NM_001136194.2 NP_001129666.1 Accepted alive Link to Nucleotide Sequence:NM_001136194.2Link to Protein Sequence:NP_001129666.1Re-query CCDS DB by Nucleotide ID:NM_001136194Re-query CCDS DB by Protein ID:NP_001129666Link to BLAST:NP_001129666.1
Original member Current member NCBI NM_014929.4 NP_055744.2 Accepted alive Link to Nucleotide Sequence:NM_014929.4Link to Protein Sequence:NP_055744.2Re-query CCDS DB by Nucleotide ID:NM_014929Re-query CCDS DB by Protein ID:NP_055744Link to BLAST:NP_055744.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129665.1 710 Q9NYY8-1 710 100% 0 0
NP_001129666.1 710 Q9NYY8-1 710 100% 0 0
NP_055744.2 710 Q9NYY8-1 710 100% 0 0

Chromosomal Locations for CCDS 2371.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 206766694 206767470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206770091 206770194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206771182 206771290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206771894 206772017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206772181 206772320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206774225 206774397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206786733 206786899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206787937 206788155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206788819 206788903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206790572 206790686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206791683 206791802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2133 nt):
ATGTTGACAACTTTGAAGCCATTTGGAAGTGTTTCAGTGGAGAGCAAAATGAATAACAAAGCGGGCTCCT
TT
TTCTGGAACCTTAGACAATTCAGTACATTAGTTTCAACAAGCAGAACTATGAGGCTATGTTGTTTGGG
A
CTTTGCAAACCAAAAATAGTTCATTCAAACTGGAACATTTTAAATAACTTTCATAACAGAATGCAATCA
ACT
GATATCATTAGATATCTCTTTCAGGATGCATTCATTTTTAAATCAGATGTTGGCTTTCAAACAAAGG
GC
ATAAGCACTCTAACAGCCCTTAGAATTGAAAGACTACTTTATGCTAAAAGACTGTTTTTTGACTCAAA
G
CAGTCTCTTGTCCCTGTTGATAAATCTGATGATGAATTGAAGAAAGTAAACCTTAATCATGAAGTCTCC
AAT
GAAGATGTTCTTACCAAGGAAACAAAACCAAACCGTATCAGCAGTAGAAAACTGTCTGAGGAATGTA
AT
TCCCTGAGTGATGTGTTAGATGCATTTTCAAAAGCGCCCACATTTCCTAGTAGCAACTATTTCACAGC
A
ATGTGGACAATTGCCAAAAGACTGTCTGATGACCAGAAGCGCTTTGAAAAACGACTGATGTTTAGCCAC
CCT
GCATTTAATCAGCTCTGTGAACATATGATGAGAGAAGCCAAGATCATGCAGTATAAGTACCTACTGT
TC
AGTCTTCACGCCATAGTGAAGCTTGGAATCCCTCAGAACACTATTTTGGTGCAGACTTTGCTGAGGGT
G
ACCCAGGAACGTATCAATGAGTGTGATGAGATATGCCTTTCAGTTTTGTCAACTGTTTTAGAGGCAATG
GAA
CCATGCAAGAATGTTCATGTTCTACGAACGGGATTCAGAATACTAGTTGATCAGCAAGTTTGGAAAA
TA
GAAGATGTCTTCACATTACAAGTTGTGATGAAGTGTATTGGAAAAGATGCACCGATTGCTCTTAAGAG
G
AAACTGGAGATGAAAGCCTTGAGGGAATTAGACAGATTTTCTGTTTTGAATAGCCAACACATGTTTGAA
GTA
CTAGCTGCCATGAATCACCGATCTCTTATACTCCTGGATGAATGCAGTAAGGTGGTCCTAGATAATA
TC
CATGGGTGTCCTTTAAGAATAATGATCAACATATTGCAGTCCTGCAAAGACCTCCAGTACCATAATTT
G
GATCTCTTCAAGGGACTTGCAGATTATGTGGCTGCAACTTTCGACATCTGGAAGTTCAGAAAAGTTCTT
TTT
ATCCTCATTTTATTTGAAAACCTTGGCTTTCGACCTGTTGGTTTAATGGACCTGTTTATGAAGAGAA
TA
GTAGAGGATCCTGAATCCCTAAACATGAAAAACATTCTATCTATTCTTCATACTTACTCTTCTCTCAA
T
CATGTCTACAAATGCCAGAACAAAGAACAGTTCGTGGAAGTTATGGCTAGTGCTCTGACTGGTTATCTT
CAC
ACTATTTCTTCTGAAAACTTATTGGATGCAGTATATTCATTTTGCTTGATGAATTACTTTCCCCTGG
CT
CCTTTTAATCAGCTTCTGCAAAAAGACATCATCAGTGAGCTGCTGACATCAGATGACATGAAGAATGC
T
TACAAGCTGCATACTTTGGATACTTGTCTAAAACTTGATGATACTGTCTATCTGAGGGACATAGCCTTG
TCA
CTCCCACAGCTGCCGCGGGAGCTGCCATCGTCACATACAAATGCAAAGGTGGCAGAGGTGCTGAGCA
GC
CTTCTGGGAGGTGAAGGACACTTCTCAAAGGATGTGCACTTGCCACACAATTATCATATTGATTTTGA
A
ATCAGAATGGACACTAACAGGAATCAAGTGCTACCACTTTCTGATGTGGATACAACTTCTGCTACAGAT
ATT
CAAAGAGTAGCTGTGCTATGTGTTTCCAGATCTGCTTATTGTTTGGGTTCAAGCCACCCCAGAGGAT
TC
CTTGCTATGAAAATGCGGCATTTGAATGCAATGGGTTTTCATGTGATCTTGGTCAATAACTGGGAGAT
G
GACAAACTAGAGATGGAAGATGCAGTCACATTTTTGAAGACTAAAATCTATTCAGTAGAAGCTCTTCCT
GTT
GCTGCTGTAAATGTGCAAAGCACACAATAA


Translation (710 aa):
MLTTLKPFGSVSVESKMNNKAGSFFWNLRQFSTLVSTSRTMRLCCLGLCKPKIVHSNWNILNNFHNRMQS
T
DIIRYLFQDAFIFKSDVGFQTKGISTLTALRIERLLYAKRLFFDSKQSLVPVDKSDDELKKVNLNHEVS
N
EDVLTKETKPNRISSRKLSEECNSLSDVLDAFSKAPTFPSSNYFTAMWTIAKRLSDDQKRFEKRLMFSH
P
AFNQLCEHMMREAKIMQYKYLLFSLHAIVKLGIPQNTILVQTLLRVTQ
ERINECDEICLSVLSTVLEAM
E
PCKNVHVLRTGF
RILVDQQVWKIEDVFTLQVVMKCIGKDAPIALKRKLEMKALRELDRFSVLNSQHMFE
V
LAAMNHRSLILLDECSKVVL
DNIHGCPLRIMINILQSCKDLQYHNLDLFKGLADYVAATFDIWKFRKVL
F
ILILFENLGFRPVGLMDLFMKRIVEDPESLNMKNILSILHTYSSLNHVYKCQNK
EQFVEVMASALTGYL
H
TISSENLLDAVYSFCLMNYFPLAPFNQLLQKDIISELLTS
DDMKNAYKLHTLDTCLKLDDTVYLRDIAL
S
LPQLPRELPSSHTNAKVAEVLSSLLGGEGHFSKDVHLPHNYHI
DFEIRMDTNRNQVLPLSDVDTTSATD
I
Q
RVAVLCVSRSAYCLGSSHPRGFLAMKMRHLNAMGFHVILVNNWEMDKLEMEDAVTFLKTKIYSVEALP
V
AAVNVQSTQ




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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