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Report for CCDS23821.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23821.1 Public Mus musculus 10 Cd24a 23 108 98 CCDS HistoryNCBI Gene:12484Re-query CCDS DB by CCDS ID:23821.1Re-query CCDS DB by GeneID:12484See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23821.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000058714.9 ENSMUSP00000057983.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000058714.9Link to Ensembl Protein Viewer:ENSMUSP00000057983.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000058714Re-query CCDS DB by Protein ID:ENSMUSP00000057983
Original member NCBI NM_009846.2 NP_033976.1 Updated not alive Link to Nucleotide Sequence:NM_009846.2Link to Protein Sequence:NP_033976.1Re-query CCDS DB by Nucleotide ID:NM_009846Re-query CCDS DB by Protein ID:NP_033976
Current member NCBI NM_009846.3 NP_033976.1 Accepted alive Link to Nucleotide Sequence:NM_009846.3Link to Protein Sequence:NP_033976.1Re-query CCDS DB by Nucleotide ID:NM_009846Re-query CCDS DB by Protein ID:NP_033976Link to BLAST:NP_033976.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033976.1 76 P24807 76 100% 0 0

Chromosomal Locations for CCDS 23821.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 43579254 43579322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 43582604 43582765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (231 nt):
ATGGGCAGAGCGATGGTGGCCAGGCTAGGGCTGGGGTTGCTGCTTCTGGCACTGCTCCTACCCACGCAGA
TT
TACTGCAACCAAACATCTGTTGCACCGTTTCCCGGTAACCAGAATATTTCTGCTTCCCCAAATCCAAG
T
AACGCTACCACCAGAGGGGGTGGCAGCTCCCTGCAGTCCACAGCTGGTCTCCTGGCTCTCTCTCTCTCT
CTT
CTACATCTCTACTGTTAG


Translation (76 aa):
MGRAMVARLGLGLLLLALLLPTQIYCNQTSVAPFPGNQNISASPNPSNATTRGGGSSLQSTAGLLALSLS
L
LHLYC




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser