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Report for CCDS23839.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23839.1 Public Mus musculus 10 Dcbld1 23 108 98 CCDS HistoryNCBI Gene:66686Re-query CCDS DB by CCDS ID:23839.1Re-query CCDS DB by GeneID:66686See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23839.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000069004.13 ENSMUSP00000068203.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000069004.13Link to Ensembl Protein Viewer:ENSMUSP00000068203.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000069004Re-query CCDS DB by Protein ID:ENSMUSP00000068203
Original member Current member NCBI NM_025705.4 NP_079981.2 Accepted alive Link to Nucleotide Sequence:NM_025705.4Link to Protein Sequence:NP_079981.2Re-query CCDS DB by Nucleotide ID:NM_025705Re-query CCDS DB by Protein ID:NP_079981Link to BLAST:NP_079981.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079981.2 503 Q9D4J3-1 503 100% 0 0

Chromosomal Locations for CCDS 23839.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 52233751 52233835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 52261727 52261939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 52284103 52284237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 52286348 52286399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 52290851 52290923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 52304587 52304720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 52311400 52311440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 52312814 52312901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 52314355 52314404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 52317032 52317151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 52319476 52319996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1512 nt):
ATGGGGACCGGGGCTGGTGGGCCGAGTGTCCTGGCGCTGCTGTTCGCCGTGTGTGCTCCGCTCCGGTTGC
AGGCGGAGGAGCTGGGTGATGGCTGTGGGCACATAGTGACCTCTCAGGACAGTGGCACAATGACATCTAA
GAATTATCCAGGGACTTACCCCAATTACACTGTGTGTGAAAAGATCATCACAGTCCCAAAGGGGAAGAGA
CTTATTCTGAGGTTGGGAGATTTGAACATTGAGTCCAAGACCTGCGCTTCTGACTATCTCCTCTTCAGCA
GTGCAACAGATCAGTATGGTCCATATTGTGGGAGTTGGGCTGTTCCCAAAGAACTCCGGCTGAACTCAAA
CGAAGTGACTGTCCTCTTCAAGAGTGGATCTCACATTTCTGGCCGGGGCTTTCTGCTGACCTACGCCAGC
AGTGACCATCCAGATTTAATAACCTGTTTGGAACGAGGCAGCCATTATTTCGAGGAAAAATACAGCAAAT
TCTGCCCAGCTGGCTGTAGAGACATAGCAGGAGATATTTCTGGGAATACAAAAGATGGTTACAGAGATAC
CTCTTTATTGTGCAAAGCTGCCATCCACGCAGGGATCATCACAGATGAACTAGGTGGCCACATCAACTTG
CTTCAGAGCAAAGGGATAAGTCACTATGAAGGACTCCTGGCCAATGGCGTGCTCTCCCGGCATGGTTCTT
TGTCGGAAAAGCGATTTCTTTTTACAACCCCAGGAATGAATATTACAACTGTGGCGATTCCATCAGTGAT
CTTCATCGCCCTCCTTCTGACTGGAATGGGGATCTTTGCAATCTGTAGAAAGAGGAAAAAGAAAGGAAAT
CCATATGTGTCAGCTGACGCTCAGAAAACAGGCTGTTGGAAGCAGATTAAATATCCCTTTGCCAGGCATC
AGTCGACGGAATTTACCATCAGCTATGACAATGAAAAAGAGATGACACAAAAGTTGGATCTCATCACTAG
TGATATGGCAGATTATCAGCAGCCTCTCATGATTGGCACAGGCACAGTCGCGAGAAAGGGCTCTACCTTC
CGACCCATGGACACAGACACTGAGGAGGTCAGAGTGAACACTGAGGCCAGCGGCCACTATGACTGTCCTC
ACCGCCCGGGCCGCCATGAGTACGCACTGCCTTTGACGCACTCAGAACCTGAGTATGCCACACCTATCGT
GGAGCGGCACCTGCTGCGAGCTCACACCTTCTCCACACAGAGCGGCTACCGAGTCCCTGGGCCCAGGCCC
ACTCACAAACACTCCCATTCCTCTGGAGGCTTTCCTCCTGCTACAGGAGCCACCCAGGTTGAAAGCTATC
AGAGGCCAGCAAGCCCCAAGCCTGTGGGTGGTGGCTATGACAAGCCTGCTGCTAGCAGCTTCTTGGACAG
CAGAGACCCAGCCTCTCAGTCACAGATGACTTCCGGGGGAGATGATGGTTATTCGGCACCCAGAAACGGT
CTTGCGCCCCTCAACCAGACGGCCATGACTGCTCTTTTGTGA

Translation (503 aa):
MGTGAGGPSVLALLFAVCAPLRLQAEELGDGCGHIVTSQDSGTMTSKNYPGTYPNYTVCEKIITVPKGKR
LILRLGDLNIESKTCASDYLLFSSATDQYGPYCGSWAVPKELRLNSNEVTVLFKSGSHISGRGFLLTYAS
SDHPDLITCLERGSHYFEEKYSKFCPAGCRDIAGDISGNTKDGYRDTSLLCKAAIHAGIITDELGGHINL
LQSKGISHYEGLLANGVLSRHGSLSEKRFLFTTPGMNITTVAIPSVIFIALLLTGMGIFAICRKRKKKGN
PYVSADAQKTGCWKQIKYPFARHQSTEFTISYDNEKEMTQKLDLITSDMADYQQPLMIGTGTVARKGSTF
RPMDTDTEEVRVNTEASGHYDCPHRPGRHEYALPLTHSEPEYATPIVERHLLRAHTFSTQSGYRVPGPRP
THKHSHSSGGFPPATGATQVESYQRPASPKPVGGGYDKPAASSFLDSRDPASQSQMTSGGDDGYSAPRNG
LAPLNQTAMTALL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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