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Report for CCDS23931.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23931.1 Public Mus musculus 10 Gstt3 23 108 98 CCDS HistoryNCBI Gene:103140Re-query CCDS DB by CCDS ID:23931.1Re-query CCDS DB by GeneID:103140See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23931.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000001715.9 ENSMUSP00000001715.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000001715.9Link to Ensembl Protein Viewer:ENSMUSP00000001715.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000001715Re-query CCDS DB by Protein ID:ENSMUSP00000001715
Original member Current member NCBI NM_133994.3 NP_598755.1 Accepted alive Link to Nucleotide Sequence:NM_133994.3Link to Protein Sequence:NP_598755.1Re-query CCDS DB by Nucleotide ID:NM_133994Re-query CCDS DB by Protein ID:NP_598755Link to BLAST:NP_598755.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_598755.1 241 Q99L20 241 100% 0 0

Chromosomal Locations for CCDS 23931.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 75774813 75775010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 75775871 75776047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 75776744 75776894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 75778101 75778188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 75780847 75780958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (726 nt):
ATGGGTCTGGAGCTCTACCTGGACCTGATGTCCCAACCCTGCCGTGCTGTCTACATCTTCGCCAAGAAGA
ACGGCATCCCCTTCCAGCTGCGTACCATAGAGCTGCTTAAAGGTCAGCAGTACACAGATTCCTTCGCCCA
GGTGAACCCTTTGAGGAAGGTGCCAGCTTTGAAGGATGGGGACTTCGTCTTGGCAGAGAGTGTGGCCATC
TTGTTGTATCTGAGTAGAAAGTACAAGGCCCCCGACCACTGGTACCCTCAGGATCTGCAGACTCGAGCTC
GTGTAGACGAGTACCTGGCATGGCAGCACACAGCCCTGCGGAGTTGTTGCACCAGGGCCATGTGGCAGAA
GATGATGTTCCCTGTGTTCCTGGGACAGCCCGTACCTCCTGAGATGCTGGCATCCACCTTGGCTGAACTG
GATGGGTGCCTGCAGGTGCTAGAGGACAAGTTCCTGCGGAACCAGGCCTTCCTTACAGGATCCCATATTT
CTGTGGCTGACTTGGTGGCCATCACAGAGCTGATGCATCCTGTCAGTGCTGGCTGCAAAATCTTTGAGAG
CCGACCCAAACTGGCTGCCTGGCGTCAGAGAGTAGAAGCCGAAGTGGGGGAGAGCCTCTTCCAGGAGGCC
CATGAAGTTGTCCTGAAGGCCAAGGATATGCCTCCCTTGATGGACCCTGCCTTGAAAGAGAAGCTGAAGC
TCTCTGTGCAGTGTTTGTTACACTGA

Translation (241 aa):
MGLELYLDLMSQPCRAVYIFAKKNGIPFQLRTIELLKGQQYTDSFAQVNPLRKVPALKDGDFVLAESVAI
LLYLSRKYKAPDHWYPQDLQTRARVDEYLAWQHTALRSCCTRAMWQKMMFPVFLGQPVPPEMLASTLAEL
DGCLQVLEDKFLRNQAFLTGSHISVADLVAITELMHPVSAGCKIFESRPKLAAWRQRVEAEVGESLFQEA
HEVVLKAKDMPPLMDPALKEKLKLSVQCLLH


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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