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Report for CCDS24190.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24190.1 Public Mus musculus 10 Frs2 23 108 98 CCDS HistoryNCBI Gene:327826Re-query CCDS DB by CCDS ID:24190.1Re-query CCDS DB by GeneID:327826See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24190.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000020381.4 ENSMUSP00000020381.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000020381.4Link to Ensembl Protein Viewer:ENSMUSP00000020381.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000020381Re-query CCDS DB by Protein ID:ENSMUSP00000020381
Original member NCBI NM_177798.3 NP_808466.1 Updated not alive Link to Nucleotide Sequence:NM_177798.3Link to Protein Sequence:NP_808466.1Re-query CCDS DB by Nucleotide ID:NM_177798Re-query CCDS DB by Protein ID:NP_808466
Current member NCBI NM_177798.4 NP_808466.1 Accepted alive Link to Nucleotide Sequence:NM_177798.4Link to Protein Sequence:NP_808466.1Re-query CCDS DB by Nucleotide ID:NM_177798Re-query CCDS DB by Protein ID:NP_808466Link to BLAST:NP_808466.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_808466.1 508 Q8C180 508 100% 0 0

Chromosomal Locations for CCDS 24190.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 117073929 117074879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 117076811 117076974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 117077512 117077670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 117078760 117078946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 117081022 117081087 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1527 nt):
ATGGGTAGCTGTTGTAGCTGTCCAGATAAAGACACTGTCCCAGATAACCATCGGAACAAGTTTAAGGTCA
TTAATGTGGATGATGATGGGAATGAGCTAGGCTCTGGTGTGATGGAACTCACAGACACAGAGCTGATTCT
GTACACCCGGAAACGGGACTCGGTAAAATGGCACTACCTCTGCCTACGACGATACGGCTATGACTCAAAT
CTGTTTTCTTTTGAAAGTGGTCGAAGGTGTCAGACTGGACAAGGAATTTTTGCTTTTAAGTGTGCCCGTG
CAGAAGAATTATTTAACATGTTGCAAGAGATTATGCAAAATAATAGTATAAATGTGGTGGAAGAGCCGGT
TGTAGAAAGGAGTAGTCATCAGACAGAGCTGGAAGTCCCTAGGACACCTCGGACACCTACAACTCCAGGG
CTCGGTGCTCAGAACTTACCTAATGGGTATCCCCGCTACCCCTCGTTTGGAGACGCTTCATCCCACCCCT
CAAGCCGGCATCCTTCGGTGGGAAGTGCTCGCTTACCTTCAGTCGGTGAAGAGTCCACACACCCTTTGCT
CGTGGCTGAGGAACAAGTACATACTTATGTTAACACTACAGGTGTGCAAGAGGAGCGAAAAAACCGTGCA
AGTGTGCATGTTCCCCCAGAGGCAAGGGTTTCTAATGCTGAGAGCAACACACCAAAAGAAGAGCCGAGTA
ACCCCGAGGACAGGGACCCGCAAGTGCTTCTTAAGCCTGAAGGAGTCAGGTTTGTGCTAGGACCAACCCC
TGTCCAGAAGCAGTTAATGGAAAAGGAGAAACTGGAGCAACTGGGAAAAGACCCAGTCAGTGGGAGTGGA
GCGGGCAACACGGAGTGGGACACCGGCTATGACAGTGACGAGCGCAGAGATGTGCCCCCTGTCAACAAAC
TGGTGTATGAAAATATAAACGGGCTATCTATTCCCAGTGCCTCAGGGGTCAGGAGAGGTCGTCTGACATC
TACCAGCACCTCAGACACCCAGAATATCAACAACTCAGCGCAGAGAAGACCTGCACTATTAAACTATGAA
AATTTACCATCTTTGCCTCCTGTTTGGGAAGCCCGCAAGCTCAGTAGGGATGAAGATGACAATTTAGGAC
CAAAGACCCCATCTCTAAATGGCTACCATAATAATCTAGATCCAATGCATAACTATGTTAATACAGAGAA
TGTAACAGTGCCGGCAAGTGCTCACAAAATAGACTATTCGAAGCGCAGGGATTGTACACCGACAGTCTTT
AACTTTGATATCAGGCGACCCAGTTTAGAACATAGGCAACTCAATTATATACAGGTGGATTTGGAAGGGG
GCAGTGACTCTGACAACCCTCAGACTCCAAAAACGCCGACCACTCCCCTCCCGCAAACCCCCACGCGGCG
CACAGAGCTGTACGCTGTGATAGACATTGAGAGAACTGCTGCTATGTCCAACTTGCAGAAAGCGCTGCCT
CGAGACGACGGTACATCTCGGAAGACGAGGCACAATAGTACTGACCTGCCCATGTGA

Translation (508 aa):
MGSCCSCPDKDTVPDNHRNKFKVINVDDDGNELGSGVMELTDTELILYTRKRDSVKWHYLCLRRYGYDSN
LFSFESGRRCQTGQGIFAFKCARAEELFNMLQEIMQNNSINVVEEPVVERSSHQTELEVPRTPRTPTTPG
LGAQNLPNGYPRYPSFGDASSHPSSRHPSVGSARLPSVGEESTHPLLVAEEQVHTYVNTTGVQEERKNRA
SVHVPPEARVSNAESNTPKEEPSNPEDRDPQVLLKPEGVRFVLGPTPVQKQLMEKEKLEQLGKDPVSGSG
AGNTEWDTGYDSDERRDVPPVNKLVYENINGLSIPSASGVRRGRLTSTSTSDTQNINNSAQRRPALLNYE
NLPSLPPVWEARKLSRDEDDNLGPKTPSLNGYHNNLDPMHNYVNTENVTVPASAHKIDYSKRRDCTPTVF
NFDIRRPSLEHRQLNYIQVDLEGGSDSDNPQTPKTPTTPLPQTPTRRTELYAVIDIERTAAMSNLQKALP
RDDGTSRKTRHNSTDLPM


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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