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Report for CCDS24263.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24263.1 Public Mus musculus 10 Gls2 23 108 98 CCDS HistoryNCBI Gene:216456Re-query CCDS DB by CCDS ID:24263.1Re-query CCDS DB by GeneID:216456See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24263.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000044776.12 ENSMUSP00000047376.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000044776.12Link to Ensembl Protein Viewer:ENSMUSP00000047376.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000044776Re-query CCDS DB by Protein ID:ENSMUSP00000047376
Original member Current member NCBI NM_001033264.3 NP_001028436.2 Accepted alive Link to Nucleotide Sequence:NM_001033264.3Link to Protein Sequence:NP_001028436.2Re-query CCDS DB by Nucleotide ID:NM_001033264Re-query CCDS DB by Protein ID:NP_001028436Link to BLAST:NP_001028436.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001028436.2 602 Q571F8 602 100% 0 0

Chromosomal Locations for CCDS 24263.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 128194726 128194907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128199182 128199281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128199637 128199758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128200173 128200302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128200886 128200965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128201206 128201369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128201559 128201617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128203823 128203855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128204075 128204133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128204661 128204727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128204861 128204911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128205088 128205264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128206872 128207003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128207298 128207390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128207561 128207622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128208591 128208667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128209106 128209169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128209288 128209444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1809 nt):
ATGCGCTCCATGAGGGCTCTGCAGAACGCGCTGAGCCGCGCGGGCAGCCACGGTCGGCGGGGAGGCTGGG
GT
CATCCGAGCCGGGGCCCGCTTCTGGGCAGGGGCGTCCGGTACTACCTCGGTGAGGCCGCAGCGCAGGG
C
AGGGGGACGCCGCACAGCCACCAGCCGCAGCACTCGGATCATGACGCCTCACACAGCGGCATGCTGCCT
CGA
CTTGGTGACCTGCTTTTCTACACTATTGCAGAGGGACAGGAGCGTATCCCTATCCACAAGTTCACCA
CG
GCTCTGAAGGCCACTGGACTGCAGACGTCAGACCCACGGCTCCAGGACTGCATGAGCAAGATGCAGCG
C
ATGGTCCAAGAGTCCAGCAGCGGTGGCCTCTTGGACCGAGAGCTCTTCCAAAAGTGTGTGAGCAGCAAC
ATT
GTGCTCCTGACTCAGGCATTCCGAAAGAAGTTTGTCATTCCTGACTTTGAGGAGTTCACGGGCCATG
TG
GATCGCATATTTGAGGATGCCAAAGAGCCCACTGGAGGCAAAGTGGCAGCCTACATCCCGCACCTGGC
C
AAATCAAACCCAGACCTTTGGGGCGTCTCCCTGTGCACTGTGGATGGGCAGCGGCACTCTGTGGGCCAC
ACG
AAGATCCCCTTCTGCCTGCAGTCCTGTGTCAAGCCCCTCACTTACGCCATCTCCGTGAGCACCTTAG
GC
ACTGACTACGTGCACAAGTTTGTGGGCAAGGAACCCAGTGGTCTGCGCTATAACAAACTCTCCCTCAA
T
GAGGAAGGAATTCCCCATAACCCCATGGTCAATGCTGGTGCCATTGTGGTCAGCTCCCTGATCAAGATG
GAC
TGTAACAAAGCAGAGAAGTTCGATTTTGTGTTACAGTATCTGAACAAGATGGCTGGGAACGAATTCA
TG
GGGTTCAGCAATGCCACATTCCAGTCAGAGAAGGAGACTGGGGATCGGAATTACGCCATCGGCTATTA
C
CTCAAGGAGAAGAAGTGCTTCCCTAAGGGTGTGGACATGATGGCTGCCCTTGATCTCTATTTCCAGCTG
TGC
TCTGTGGAGGTTACCTGTGAGTCAGGCAGTGTCATGGCGGCCACTCTGGCCAATGGCGGCATCTGCC
CT
ATCACAGGGGAGAGCGTGCTGAGCGCCGAGGCCGTGCGCAACACCCTCAGCCTCATGCATTCCTGTGG
C
ATGTATGACTTCTCGGGCCAGTTTGCCTTCCATGTGGGCCTGCCAGCCAAGTCAGCTGTGTCAGGAGCC
ATC
CTCCTGGTTGTACCCAATGTCATGGGCATGATGTGTCTGTCGCCGCCGTTAGACAAGCTGGGGAACA
GC
CAAAGGGGCATCAACTTCTGCCAGAAGTTGGTGTCTCTCTTTAACTTCCACAACTATGACAACCTGCG
G
CACTGCGCTCGGAAGTTAGACCCACGGAGGGAAGGAGGAGAGGTTCGGAACAAGACCGTGGTGAACCTG
CTA
TTTGCTGCATATAGTGGAGATGTCTCGGCCCTTCGAAGGTTTGCATTGTCGGCCATGGATATGGAGC
AG
AAGGACTATGATTCCCGCACAGCCCTACATGTCGCTGCAGCTGAAGGGCACATTGAAGTTGTCAAATT
T
CTGATCGAGGCTTGCAAAGTGAATCCTTTTGTCAAGGACAGGTGGGGCAACATTCCCCTGGACGATGCT
GTG
CAGTTCAACCACCTGGAGGTGGTCAAACTGCTTCAAGATTACCATGACTCCTACTTGCTCTCTGAGA
CT
CAAGCTGAGGCGGCAGCTGAGACCCTGTCCAAAGAGAATCTAGAGAGCATGGTATGA


Translation (602 aa):
MRSMRALQNALSRAGSHGRRGGWGHPSRGPLLGRGVRYYLGEAAAQGRGTPHSHQPQHSDHDASHSGMLP
R
LGDLLFYTIAEGQERIPIHKFTT
ALKATGLQTSDPRLQDCMSKMQRMVQESSSGGLLDRELFQKCVSSN
I
VLLTQAFRKKFVIPDFEEFTGHVDRIFEDAKEPTGGK
VAAYIPHLAKSNPDLWGVSLCTVDGQRHSVGH
T
KIPFCLQSCVKPLTYAISVSTLGTDYVHKFVGKEPSGLRYNKLSLNEE
GIPHNPMVNAGAIVVSSLIKM
D
CNKAEKFDF
VLQYLNKMAGNEFMGFSNATFQSEKETGDRNYAIGYYLKEKKCFPKGVDMMAALDLYFQL
C
SVEVTCESGSVMAATLANGGICPITGESVLSAEAVRNTLSLMHSCGMYDFSGQFAFH
VGLPAKSAVSGA
I
LLVVPNVMGMMCLSPPLDKLGNSQRGINFCQ
KLVSLFNFHNYDNLRHCARKLDPRREGGEVRNKTVVNL
L
FAAYSGDVSALR
RFALSAMDMEQKDYDSRTALHVAAAEGHIEVVKFLIEACKVNPFVKDRWGNIPLDDA
V
QFNHLEVVKLLQDYHDSYLLSETQAEAAAETLSKENLESMV




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser