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Report for CCDS24705.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24705.1 Public Mus musculus 11 Anxa6 23 108 98 CCDS HistoryNCBI Gene:11749Re-query CCDS DB by CCDS ID:24705.1Re-query CCDS DB by GeneID:11749See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24705.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000108883.9 ENSMUSP00000104511.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000108883.9Link to Ensembl Protein Viewer:ENSMUSP00000104511.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000108883Re-query CCDS DB by Protein ID:ENSMUSP00000104511
Original member Current member NCBI NM_013472.5 NP_038500.2 Accepted alive Link to Nucleotide Sequence:NM_013472.5Link to Protein Sequence:NP_038500.2Re-query CCDS DB by Nucleotide ID:NM_013472Re-query CCDS DB by Protein ID:NP_038500Link to BLAST:NP_038500.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_038500.2 673 P14824 673 100% 0 0

Chromosomal Locations for CCDS 24705.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 54979462 54979521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54981616 54981738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54983298 54983356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54985076 54985171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54986122 54986215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54987051 54987068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54991391 54991444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54992287 54992366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54994284 54994374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54994467 54994580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54994885 54994979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54996313 54996394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54998535 54998613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54999795 54999853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 55001211 55001333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 55003979 55004037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 55004667 55004762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 55005113 55005206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 55005785 55005841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 55007858 55007937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 55009110 55009200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 55010992 55011105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 55011703 55011797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 55013825 55013915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 55021537 55021554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2022 nt):
ATGGCCAAAATAGCACAGGGTGCCATGTACCGAGGCTCTGTCCACGACTTCCCAGAGTTTGACGCAAATC
AGGATGCTGAGGCCTTGTACACAGCCATGAAGGGCTTCGGCAGTGACAAGGAGTCCATACTGGAGCTGAT
CACCTCCCGCAGCAACAAGCAGAGGCAGGAGATCTGCCAGAATTACAAGTCCCTGTATGGCAAGGACCTC
ATCGAAGACTTGAAGTATGAGTTGACGGGGAAGTTCGAGCGGCTGATAGTGAACCTGATGAGGCCACTTG
CCTATTGTGACGCCAAAGAGATTAAAGACGCCATCTCGGGCGTTGGCACAGATGAGAAGTGCCTTATTGA
AATTTTGGCTTCCCGGACCAATGAGCAGATGCACCAGCTGGTGGCCGCATACAAAGACGCCTATGAGCGA
GACCTGGAATCTGACATCATTGGAGACACTTCCGGCCACTTCCAGAAGATGCTGGTGGTACTGCTCCAGG
GAACCCGGGAGAATGACGATGTTGTGAGCGAGGATTTGGTCCAGCAGGATGTCCAGGACCTGTATGAGGC
AGGGGAACTGAAATGGGGAACAGATGAGGCCCAGTTCATCTACATCTTGGGAAACCGCAGCAAACAGCAC
CTACGACTGGTGTTTGATGAGTATCTGAAGACCACAGGGAAGCCCATCGAAGCCAGTATCAGAGGGGAGC
TGTCTGGAGACTTTGAGAAGCTGATGTTGGCCGTGGTGAAGTGCATCCGAAGCACCCCGGAGTATTTTGC
GGAAAGGCTGTTCAAAGCCATGAAGGGCCTAGGGACCCGAGACAACACTCTGATCCGCATCATGGTCTCC
AGGAGCGAGCTGGATATGCTTGACATCCGGGAGATCTTCCGGACCAAGTATGAGAAGTCACTCTACAGCA
TGATCAAGAATGATACTTCCGGTGAATACAAGAAGGCTCTGCTGAAGCTGTGTGGAGGAGATGATGATGC
CGCTGGCCAGTTCTTCCCGGAGGCAGCACAGGTGGCCTATCAGATGTGGGAACTTAGTGCAGTGTCCCGA
GTCGAGCTGAAGGGTACTGTGTGTGCAGCCAATGATTTCAACCCTGACGCTGATGCCAAGGCCCTGCGGA
AAGCCATGAAGGGAATTGGAACTGATGAAGCCACCATCATCGACATCGTCACCCACCGGAGCAACGCCCA
GCGGCAGCAGATCCGGCAGACCTTCAAATCTCACTTTGGCCGGGATTTAATGGCTGACCTGAAGTCAGAG
ATCTCGGGAGACCTGGCAAGGCTGATTCTGGGGCTCATGATGCCACCTGCCCATTACGATGCTAAGCAGC
TGAAGAAAGCTATGGAGGGAGCCGGCACAGATGAAAAGACTCTCATAGAAATCCTGGCCACCCGGACCAA
TGCTGAAATCCGGGCCATCAACGAGGCCTACAAGGAGGATTATCACAAGTCCCTGGAGGATGCCTTGAGC
TCAGACACATCTGGCCACTTCAGAAGGATTCTCATTTCTCTGGCCACAGGAAATCGAGAGGAAGGAGGAG
AAAACCGGGACCAGGCCCAGGAAGATGCCCAGGTGGCTGCTGAGATCTTGGAAATAGCAGACACCCCCAG
CGGAGACAAAACTTCCTTGGAGACACGCTTCATGACCGTCCTGTGCACCCGTAGCTATCCCCACCTGCGC
AGAGTCTTCCAGGAGTTCATCAAGAAGACCAACTATGACATAGAGCATGTCATCAAGAAGGAGATGTCTG
GGGATGTCAAGGACGCATTTGTGGCCATCGTTCAGAGTGTCAAGAACAAGCCTCTCTTCTTTGCTGATAA
ACTGTACAAGTCCATGAAGGGTGCTGGCACAGATGAGAAGACCCTCACCAGGGTGATGGTGTCTCGGAGT
GAGATAGATCTGCTCAACATCCGGAGGGAATTCATTGAGAAATATGACAAGTCTCTACACCAAGCCATTG
AGGGTGACACCTCTGGAGACTTCATGAAGGCTTTGCTTGCTCTGTGTGGCGGAGAGGACTAA

Translation (673 aa):
MAKIAQGAMYRGSVHDFPEFDANQDAEALYTAMKGFGSDKESILELITSRSNKQRQEICQNYKSLYGKDL
IEDLKYELTGKFERLIVNLMRPLAYCDAKEIKDAISGVGTDEKCLIEILASRTNEQMHQLVAAYKDAYER
DLESDIIGDTSGHFQKMLVVLLQGTRENDDVVSEDLVQQDVQDLYEAGELKWGTDEAQFIYILGNRSKQH
LRLVFDEYLKTTGKPIEASIRGELSGDFEKLMLAVVKCIRSTPEYFAERLFKAMKGLGTRDNTLIRIMVS
RSELDMLDIREIFRTKYEKSLYSMIKNDTSGEYKKALLKLCGGDDDAAGQFFPEAAQVAYQMWELSAVSR
VELKGTVCAANDFNPDADAKALRKAMKGIGTDEATIIDIVTHRSNAQRQQIRQTFKSHFGRDLMADLKSE
ISGDLARLILGLMMPPAHYDAKQLKKAMEGAGTDEKTLIEILATRTNAEIRAINEAYKEDYHKSLEDALS
SDTSGHFRRILISLATGNREEGGENRDQAQEDAQVAAEILEIADTPSGDKTSLETRFMTVLCTRSYPHLR
RVFQEFIKKTNYDIEHVIKKEMSGDVKDAFVAIVQSVKNKPLFFADKLYKSMKGAGTDEKTLTRVMVSRS
EIDLLNIRREFIEKYDKSLHQAIEGDTSGDFMKALLALCGGED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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