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Report for CCDS24867.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24867.1 Public Mus musculus 11 Mfsd6l 23 108 98 CCDS HistoryNCBI Gene:215723Re-query CCDS DB by CCDS ID:24867.1Re-query CCDS DB by GeneID:215723See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 24867.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000053211.7 ENSMUSP00000061601.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000053211.7Link to Ensembl Protein Viewer:ENSMUSP00000061601.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000053211Re-query CCDS DB by Protein ID:ENSMUSP00000061601
Original member Current member NCBI NM_146004.1 NP_666116.1 Accepted alive Link to Nucleotide Sequence:NM_146004.1Link to Protein Sequence:NP_666116.1Re-query CCDS DB by Nucleotide ID:NM_146004Re-query CCDS DB by Protein ID:NP_666116Link to BLAST:NP_666116.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_666116.1 586 Q8R3N2 586 100% 0 0

Chromosomal Locations for CCDS 24867.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 68556325 68558085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1761 nt):
ATGAGCCCCAACCCGCAATGGGACGTCCCCAGGGCACTACGGGTGGCCAGGCTCTTCCACTTGGTGTGCG
GA
GTCCGGGATGCCTGTGTGACTCCGTTCCTGACCCTCTACCTGAGGCAACTGGGTGTGGCCGCGCCCTT
G
GTGGGCATCCTCATGGGAACCAAGCACCTGATCGCTACCTGCTGGATTCCCTTCTGTGCCTTCCTGGCC
AAA
CGCTACCAGAAAAGGAGAATGTTTTTGACTGGCTCATTGCTGAGCTCCGCAGGCGCCAGCCTCCTGA
TG
GTCCTCGTCCCACCGGTGGACAGAAATCTGGTCAACCACTTTTGTAATGGAAGCAGTAGAGTGGCCAC
C
ACTATCTTACCGCTGGGGGTCACACAAACTGTGATCATGACCCCTACCCAGGGGTCTGGAGCACCCAAC
CTC
CCAGGCAGCAGGCACACCAGAGCCCTGGACACTTCTGGCTTTCCAAATGGATCTGAAGGAACATTTA
GC
GGTCTGCAGACCTATTTAGTGGGCTCTGTTGAAGGAGCCAGGACCACTACACAAGGCCTCCATCTTGT
C
ACTTCTGGGTTGAGAGATAATTCCCAGAAAGGGACTTTTGAGGTAGGCAATGTTACCCTGAATCTACTT
CCT
GGAAGTACAGCTCTTGGAGGTCCCGTCAACTTGTCAAAGCCCCAGGGGGACACCCAGACCCCTGATC
AC
TCCTCGAAAGGGTCACCGTGGACTTTCATCCTCTCCTTGGGAGTTGTTGTATTCTGGGAACTCCTGGC
A
GCCCCTCTGGAGCAGGTGGCGGATGACAGTCTTTATGAATACCTGGATTTCGTAGACGCCACTGATCGG
AAC
AGAGACCTGTGGGTGTGGAAACTGTTAGGTGTATCAGCAGGTGTGTGTGGCATCGCAGCCTTGGTGG
GG
CATCTGGAATGCCTCCTCGTGGCCAATGGTCCTCAGGGCGTGATTTATTTCTACAGCTACTCGCTGGT
C
AGTACCCTGGCCTTAGCAGTGAGCACTGCCTTTCCTGTTCCCATAGACCAGCAACAGGGGCCCAGCTAC
AAA
GCCATCAAAGCTCTGTCCCTCATAAGGGGTGACTCCCGCCTCATCCTCCTGGCCTTCACTGTCTTTT
GG
ATAGGAGCCACTGCCAGCACTGTGCAGGACTTTCTGTTCTGGCACATGAAGGACCACGGCAGCAGTGA
G
CTGGTGATGGGTTTCTCAGTGGCTCTCAGCTTGCTAGGAGAAATTCTGTTTCACCCGTTCAGAACTTCG
TTG
CTAAGGAAACTGTCTAGGGTGGGTGTGCTGGGGCTGGGGCTGGGCTGCCTGGCCCTGCAGGTGCTTT
AC
TATGCTTTCATCTGGAGCTGGTGGTCCGTCCTCCCTGTTCAGATCCTGAGCACCATCAGCAGTGGGGC
T
CTTTGGTGGGCTGTGGGGGCCTCCATAGAGGACCTGGCCTTCTCCGGGATGGAGAGGTCTCTGGGCACC
ATG
TTCCGGGGTCACTTTTATGGGAGCGGCTGCAGCCTAGGCAGCTTTGTCGGGGGCTTTGTAGTTCTGC
AC
TTCGGCATAGCTGTGCTCTACGAAGCCTGTTGTGTGGTCCTGTTGCTTTGGCTGGCCTTGTTCCTGTC
C
ATCCAGCCCAGGCTGCCCCAAGAGCAGAGGATCAACTACTCAAAGCTGCTAGCTATGGGAGGGAGTGAC
TCC
AGTGACTCCGAGCAGGGGTCAGAAGGGGACTGGCTTGTGAAGGCCATGAGGGAGGAGCACTCCGACT
GG
AAGGGCTGA


Translation (586 aa):
MSPNPQWDVPRALRVARLFHLVCGVRDACVTPFLTLYLRQLGVAAPLVGILMGTKHLIATCWIPFCAFLA
K
RYQKRRMFLTGSLLSSAGASLLMVLVPPVDRNLVNHFCNGSSRVATTILPLGVTQTVIMTPTQGSGAPN
L
PGSRHTRALDTSGFPNGSEGTFSGLQTYLVGSVEGARTTTQGLHLVTSGLRDNSQKGTFEVGNVTLNLL
P
GSTALGGPVNLSKPQGDTQTPDHSSKGSPWTFILSLGVVVFWELLAAPLEQVADDSLYEYLDFVDATDR
N
RDLWVWKLLGVSAGVCGIAALVGHLECLLVANGPQGVIYFYSYSLVSTLALAVSTAFPVPIDQQQGPSY
K
AIKALSLIRGDSRLILLAFTVFWIGATASTVQDFLFWHMKDHGSSELVMGFSVALSLLGEILFHPFRTS
L
LRKLSRVGVLGLGLGCLALQVLYYAFIWSWWSVLPVQILSTISSGALWWAVGASIEDLAFSGMERSLGT
M
FRGHFYGSGCSLGSFVGGFVVLHFGIAVLYEACCVVLLLWLALFLSIQPRLPQEQRINYSKLLAMGGSD
S
SDSEQGSEGDWLVKAMREEHSDWKG




Links Key
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 Genome Browser Links:   Ensembl Genome Browser
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