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Report for CCDS25754.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25754.1 Public Mus musculus 11 Rac3 23 108 98 CCDS HistoryNCBI Gene:170758Re-query CCDS DB by CCDS ID:25754.1Re-query CCDS DB by GeneID:170758See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 25754.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000018156.11 ENSMUSP00000018156.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000018156.11Link to Ensembl Protein Viewer:ENSMUSP00000018156.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000018156Re-query CCDS DB by Protein ID:ENSMUSP00000018156
Original member Current member NCBI NM_133223.4 NP_573486.1 Accepted alive Link to Nucleotide Sequence:NM_133223.4Link to Protein Sequence:NP_573486.1Re-query CCDS DB by Nucleotide ID:NM_133223Re-query CCDS DB by Protein ID:NP_573486Link to BLAST:NP_573486.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_573486.1 192 P60764 192 100% 0 0

Chromosomal Locations for CCDS 25754.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 120721607 120721641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 120722231 120722302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 120722509 120722626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 120722806 120722868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 120723181 120723340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 120723479 120723609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (579 nt):
ATGCAGGCCATCAAGTGCGTGGTGGTTGGCGATGGTGCCGTGGGGAAGACGTGCCTGCTGATCAGCTACA
CGACCAACGCCTTCCCAGGAGAATATATCCCCACAGTTTTCGACAACTACTCAGCCAACGTGATGGTGGA
TGGGAAGCCAGTTAACCTGGGGCTGTGGGACACTGCTGGCCAGGAAGACTACGATAGGCTTCGGCCACTC
TCCTATCCTCAAACAGATGTCTTTCTGATCTGCTTCTCCCTGGTGAGCCCAGCCTCCTTTGAGAATGTCC
GTGCCAAGTGGTACCCAGAGGTGCGGCACCACTGCCCACACACACCCATCCTTCTGGTGGGCACCAAGCT
GGACCTCCGTGATGACAAGGATACGATTGAACGGCTGCGGGACAAGAAGCTGGCACCCATAACCTACCCC
CAAGGCCTGGCCATGGCCCGAGAGATTGGTTCCGTCAAGTACCTGGAGTGCTCAGCTCTGACCCAGAGAG
GTCTGAAGACAGTGTTCGACGAGGCCATCCGGGCTGTGCTCTGCCCACCTCCAGTGAAAAAGCCAGGCAA
GAAGTGCACTGTATTCTAG

Translation (192 aa):
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPL
SYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLRDDKDTIERLRDKKLAPITYP
QGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVLCPPPVKKPGKKCTVF


Links Key
 Links to:   History report
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