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Report for CCDS25963.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25963.1 Public Mus musculus 12 Dact1 23 108 98 CCDS HistoryNCBI Gene:59036Re-query CCDS DB by CCDS ID:25963.1Re-query CCDS DB by GeneID:59036See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 25963.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000061273.11 ENSMUSP00000058943.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000061273.11Link to Ensembl Protein Viewer:ENSMUSP00000058943.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000061273Re-query CCDS DB by Protein ID:ENSMUSP00000058943
Original member Current member NCBI NM_021532.4 NP_067507.2 Accepted alive Link to Nucleotide Sequence:NM_021532.4Link to Protein Sequence:NP_067507.2Re-query CCDS DB by Nucleotide ID:NM_021532Re-query CCDS DB by Protein ID:NP_067507Link to BLAST:NP_067507.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067507.2 778 Q8R4A3 778 100% 0 0

Chromosomal Locations for CCDS 25963.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 71309984 71310307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 71312686 71312818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 71313785 71313940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 71317171 71318894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2337 nt):
ATGAAGCCGGACGCAGCGCGCGAGCCGGAGCCGCTGAGCCCCGGCCGGGGCGCGGAGGCCGAGGGGCGCT
GG
CGCGAGAGGGGCGAGGCGGACACGGAGCGGCAGCGTACCCGCGAGCGCCAGGAGGCCACGCTGGCGGG
G
CTGGCGGAGCTGGGGTACCTGCGGCAACGCCAAGAGCTGCTGGTGCGCGGTGCGCTGCGCTGCTCCGGG
ACC
GTGGGGACCGTCGCGCCGCGCTCCGGGGAGCTGCGGGGAGACGCGGCGCAGCGCAGCCGCCTGGAGG
AG
AAGTTCCTGGAAGAGAACATCTTGCTGCTGCGAAGGCAGTTGAATTGTTTGAGGAGAAGAGATGCCGG
T
TTGTTGAATCAGTTGCAAGAACTTGACAAGCAGATAAGTGACCTGAGACTGGATGTGGAGAAGACATCT
GAA
GAGCACCTGGAGACAGACAGCCGGCCTAGCTCAGGGTTTTATGAGCTGAGTGATGGAGCTTCGGGCT
CC
CTCTCTAACTCCTCCAACTCCGTGTTCAGTGAGTGTTTGTCCAGTTGCCATTCCAGCACCTGCTTCTG
C
AGCCCCTTGGAGGCGGCCTTGACCATCTCAGACGGTTGCCCCAAATCTGCAGATGTGAATCCTAAATAC
CAG
TGTGATCTTGTGTCTAAAAACGGGAATGACGTATATCGCTACCCCAGTCCACTTCATGCTGTGGCTG
TG
CAGAGCCCAATGTTTCTCCTTTGTCTGACGGGCAACACTCTGAGGGAAGAGGAGGGGCTTGGGAGCCA
T
GCCAGCGACATCTGCATTGGATCTGAACTGAACGCCACCAAAACAGACAATTCCCTGCCATCTCCAAGC
AGT
TTGTGGTCCGCTTCCCATCCTGCATCCAGTAAGAAAATGGATGGGTATATTTTGAGCCTCGTGCAGA
AG
AAAACACACCCTGTAAGGACCAATAAACCTAGAACCAGTGTGAACGCTGACCCTACCAAGGGCCTTCT
G
AGGAATGGAAGTGTGTGTGTCAGGGCCCCTAGTGGCGTCCCACCGGGCAGTAGTGTGAACTTTAAGAAT
ACA
AAACAGATGTGTTTGCCCGCTGGGGGAATAACCTCTTTGGAAAACGGGCCATTCTCCCCTCCTAAGC
AG
AGGTCCAAAGACTCAAAGACAGACCAGTTAGAAAGCAAGAGGTTGGCTCTGCCGGAGAGCTGCTCGGC
A
GGCGCCGCCATGGAACCCCAAAGCAAGCATGTGCCCAAAGCCGCCAAGGCAGCCTCTCAAGAGCTCACA
AGG
TGTCAAGCCGGGCTGGGGGAATCCATGAAGGAAAGCAATCAGGCCTCCGCTGTTTCTCCTAAAACAA
GT
CCTGGCAGAGGCCCTGTCGCCCCCGCAGAGAGCAAAGCCCTGCAGCTCCCGAAAAAGATGTCGCAGAA
G
AACAGCCTCCAGGCTGTGCCCGCGCTGGACAGGCCGGCCTTGGACTTCAAAAGCGAGGGCTCATCTCAA
AGC
CTCGAGGAAGGGCATCTGGTGAAAGCTCAGTTCATTCCGGGGCAGCAGGCGGCCGCCAGGCCTCACC
GT
GCACACAGGAACCCGGGTGTCGCAAGGAGCGCCACCTTGAAGGCCCGCGGCCAGGCAGCCATGGAACA
C
GGCCTGCCCACCGTCAGGGAGAAACCGCGGGCAGCAGGCAAGAAGTGCCGTTTCCCAGACGACTCGGAT
ACA
AATAAGAAATTCAGGAAGACCTCCGCCAAGGGCCGGCGCAGTGGCGGGCTGCAGGACGCTGGCCTTC
CC
GGTAGGGCCCTGGGCACCGGCGGCCATCGGGCGGGTAGCAGGGCGCACGCGCATGGCCGGGAGCCCGT
G
GTGGCCAAACCGAAGCACAAGCGAACCGACTACCGGCGGTGGAAATCGTCAGCCGAGGTCTCCTACGAA
GAA
GCCCTGCGGAGGGCCCGGAGGGCTCGCAGGGAGCACGGGGCTGCCTACCGGGTGGCTGTCGCCCTGC
CT
TACGCCAGCCCCTATGCCTACGTGCCCAGCGACTCCGAGTACTCGGCGGAGTGCGAGTCGCTCTTCCA
C
TCCACGGTGGTGGACACCAGCGAGGACGAGCAGAGCAACTACACCACCAACTGCTTCGGCGACAGCGAG
TCC
AGCGTGAGCGAAGGCGACTTCGTGGGCGAGAGCACCACCACCAGCGACTCAGAGGAGAGCGGGGGTT
TA
ATCTGGTCCCAGTTTGTCCAGACTCTCCCGATTCAAACGGTCACGGCCCCAGACCTCCACACCCGTCC
C
ACAAAAACCTTTGTCAAAATCAAGGCTTCGCACAACCTCAAGAAGAAGATCCTCCGTTTCCGCTCTGGC
TCT
TTGAAACTGATGACTACCGTTTGA


Translation (778 aa):
MKPDAAREPEPLSPGRGAEAEGRWRERGEADTERQRTRERQEATLAGLAELGYLRQRQELLVRGALRCSG
T
VGTVAPRSGELRGDAAQRSRLEEKFLEENILLLRRQL
NCLRRRDAGLLNQLQELDKQISDLRLDVEKTS
E
EHLETDSRPSS
GFYELSDGASGSLSNSSNSVFSECLSSCHSSTCFCSPLEAALTISDGCPKSADVNPKY
Q
CDLVSKNGNDVYRYPSPLHAVAVQSPMFLLCLTGNTLREEEGLGSHASDICIGSELNATKTDNSLPSPS
S
LWSASHPASSKKMDGYILSLVQKKTHPVRTNKPRTSVNADPTKGLLRNGSVCVRAPSGVPPGSSVNFKN
T
KQMCLPAGGITSLENGPFSPPKQRSKDSKTDQLESKRLALPESCSAGAAMEPQSKHVPKAAKAASQELT
R
CQAGLGESMKESNQASAVSPKTSPGRGPVAPAESKALQLPKKMSQKNSLQAVPALDRPALDFKSEGSSQ
S
LEEGHLVKAQFIPGQQAAARPHRAHRNPGVARSATLKARGQAAMEHGLPTVREKPRAAGKKCRFPDDSD
T
NKKFRKTSAKGRRSGGLQDAGLPGRALGTGGHRAGSRAHAHGREPVVAKPKHKRTDYRRWKSSAEVSYE
E
ALRRARRARREHGAAYRVAVALPYASPYAYVPSDSEYSAECESLFHSTVVDTSEDEQSNYTTNCFGDSE
S
SVSEGDFVGESTTTSDSEESGGLIWSQFVQTLPIQTVTAPDLHTRPTKTFVKIKASHNLKKKILRFRSG
S
LKLMTTV




Links Key
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 Genome Browser Links:   Ensembl Genome Browser
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