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Report for CCDS26732.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26732.1 Public Mus musculus 13 Marveld2 23 108 98 CCDS HistoryNCBI Gene:218518Re-query CCDS DB by CCDS ID:26732.1Re-query CCDS DB by GeneID:218518See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26732.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022137.13 ENSMUSP00000022137.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022137.13Link to Ensembl Protein Viewer:ENSMUSP00000022137.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000022137Re-query CCDS DB by Protein ID:ENSMUSP00000022137
Original member Current member EBI ENSMUST00000168772.1 ENSMUSP00000126438.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000168772.1Link to Ensembl Protein Viewer:ENSMUSP00000126438.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000168772Re-query CCDS DB by Protein ID:ENSMUSP00000126438
Original member Current member EBI ENSMUST00000225754.1 ENSMUSP00000153294.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000225754.1Link to Ensembl Protein Viewer:ENSMUSP00000153294.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000225754Re-query CCDS DB by Protein ID:ENSMUSP00000153294
Original member Current member NCBI NM_001038602.4 NP_001033691.1 Accepted alive Link to Nucleotide Sequence:NM_001038602.4Link to Protein Sequence:NP_001033691.1Re-query CCDS DB by Nucleotide ID:NM_001038602Re-query CCDS DB by Protein ID:NP_001033691Link to BLAST:NP_001033691.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001033691.1 555 Q3UZP0 555 100% 0 0

Chromosomal Locations for CCDS 26732.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 100597289 100597411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100597802 100597852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100600461 100600632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100600889 100601037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100607777 100607812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100611433 100612569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1668 nt):
ATGTCGTCAAGTGACGCAAGGTCCAGGATTCGGGACAGGGGCTATAGTGAGGTTCCCAGGGACACGTCTT
GTCCAGATGGTACCATAAGAACCTTCCAGTCTCTTCACAGCAGTGAGCTGGCAGTGAGCGCAGATCCTCT
GCCTCCTCCCCCTCTCCCATTACAGCCACCATTCGGCCCCAGCTTCTACTCAAGTGACACAGAGGAGCCA
GCAGTGGCACCAGACCTCAAGCCGGTAAGACGCTTTGTTCCCGACTCCTGGAAAAATTTCTTCAGAGGGA
AGAAAAAGGACCCAGAATGGGATAACCCGGTGTCTGATATCAGATACATCTCCGATGGTGTGGAGTGTTC
ACCTCCAGCCTCTCCAGCAAGGGCAAACCACCACCCTTACAAAGACCCTTCCAGAGGGTCGCAAGGCACC
TTTAATTCCCAGCACGAGGCAGATGCCATGTTTGCCCACGACCCCTATGCATCCTTAGACCGGCGCACAC
AGACGGCGCGGACGTATTCTGAGAAGGTAGAGGAATACAATCTGCGCTACGCCTACATGAAGTCGTGGGC
AGGCCTGCTGAGAATCCTGGGTGTGGTGGAACTGCTTCTGGGGGCCGGCGTCTTCGCGTGTGTCACGGCT
TACATCCACAAGGACAACGAGTGGTACAACTTGTTTGGCTATACACAGCCCTATGGCATGGGAGGTCTCG
GCAGCCTCGGCAATACATATGGGGGTTATTACTACAGTGGCCCCAAGACCCCCTTCGTACTCGTGGTGGC
TGGATTGGCTTGGATCACCACCATTATTATCCTGGTGCTTGGCATGTCCATGTATTACCGCACCATCCTT
TTGGACTCTAACTGGTGGCCCCTGACTGAGTTCGGAGTTAACGTTGCGTTGTTTATCCTGTACATGGCTG
CAGCCATAGTCTATGTGAACGATACCAACCGAGGTGGACTCTGCTACTACCCGTTATTTAATACACCAAT
GAATGCGATGTTCTGCCGGGTAGAAGGAGGTCAGATAGCTGCAATGATCTTCCTGTTTGTCACCATGATA
GTTTATCTCGTCAGCGCCCTGGTCTGCCTAAAGCTGTGGAGGCACGAAGCGGCTCGGAGACATCGGGAGT
TCCTGGAGCAGCAGGAGATAAATGACCCGTCGTTGTCATCGAAAAGGAAAATGTGTGAAGCGGCCATCAG
TGATCGACAGAGGGATCAGGAAGTTAATGTCAAAGACTTGAGAACAACAACTAAAATGACTCCTGAGCTG
TTGAGTGGGCACATCCCTCCCGGCCACATTCCGAAGCCTATCGTGATGCCTGACTACGTGGCAAAATATC
CTGTGATTCAGACAGATGACGATCGAGAACGCTATAAGGCTGTGTTCCAAGACCAGTTTTCAGAGTACAA
AGAGCTGTCTGCGGAAGTGCAGGCCATCCTGAGGAAGTTTGACGAGCTGGACACAGTGATGAGCAGGCTC
CCACATCATTCTGAAAACCGCCAGGAACACGAGAGAATTTCAAGAATTCATGAAGAGTTTAGGAAAAAGA
AGAATGACCCTTCGTTTCTGGAAAAAAAGGAGCGTTGCGATTACCTCAAGAACAAACTCTCTCACATAAA
GCAAAGAATTCAAGAATACGATAAAGTGATGAATTGGGATACGCAAGGTTATCCCTAG

Translation (555 aa):
MSSSDARSRIRDRGYSEVPRDTSCPDGTIRTFQSLHSSELAVSADPLPPPPLPLQPPFGPSFYSSDTEEP
AVAPDLKPVRRFVPDSWKNFFRGKKKDPEWDNPVSDIRYISDGVECSPPASPARANHHPYKDPSRGSQGT
FNSQHEADAMFAHDPYASLDRRTQTARTYSEKVEEYNLRYAYMKSWAGLLRILGVVELLLGAGVFACVTA
YIHKDNEWYNLFGYTQPYGMGGLGSLGNTYGGYYYSGPKTPFVLVVAGLAWITTIIILVLGMSMYYRTIL
LDSNWWPLTEFGVNVALFILYMAAAIVYVNDTNRGGLCYYPLFNTPMNAMFCRVEGGQIAAMIFLFVTMI
VYLVSALVCLKLWRHEAARRHREFLEQQEINDPSLSSKRKMCEAAISDRQRDQEVNVKDLRTTTKMTPEL
LSGHIPPGHIPKPIVMPDYVAKYPVIQTDDDRERYKAVFQDQFSEYKELSAEVQAILRKFDELDTVMSRL
PHHSENRQEHERISRIHEEFRKKKNDPSFLEKKERCDYLKNKLSHIKQRIQEYDKVMNWDTQGYP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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