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Report for CCDS3012.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3012.1 Public Homo sapiens 3 WDR5B 24 110 108 CCDS HistoryNCBI Gene:54554Re-query CCDS DB by CCDS ID:3012.1Re-query CCDS DB by GeneID:54554See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3012.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000330689.6 ENSP00000330381.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000330689.6Link to Ensembl Protein Viewer:ENSP00000330381.4Re-query CCDS DB by Nucleotide ID:ENST00000330689Re-query CCDS DB by Protein ID:ENSP00000330381
Original member Current member NCBI NM_019069.4 NP_061942.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_019069.4Link to Protein Sequence:NP_061942.2Re-query CCDS DB by Nucleotide ID:NM_019069Re-query CCDS DB by Protein ID:NP_061942Link to BLAST:NP_061942.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061942.2 330 Q86VZ2 330 100% 0 0

Chromosomal Locations for CCDS 3012.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 122414536 122415528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (993 nt):
ATGGCAACCAAGGAGTCAAGAGACGCCAAAGCACAGTTGGCCCTCTCCTCATCGGCCAATCAGAGCAAGG
AAGTGCCTGAAAACCCAAACTATGCTCTCAAATGTACTCTTGTGGGACACACGGAAGCAGTGTCATCAGT
TAAGTTTAGTCCTAATGGAGAATGGCTAGCAAGTTCTTCTGCTGATAGGCTAATCATAATTTGGGGAGCA
TATGATGGAAAATATGAGAAAACACTCTATGGTCATAATTTGGAAATATCGGATGTTGCCTGGTCATCAG
ATTCCAGTCGTCTTGTTTCTGCCTCAGATGATAAAACTCTAAAATTATGGGATGTGAGATCTGGAAAATG
TTTGAAAACACTGAAGGGGCACAGTAATTATGTCTTTTGTTGTAACTTCAATCCGCCATCCAACCTTATA
ATCTCGGGATCTTTTGATGAGACTGTAAAAATATGGGAGGTGAAAACAGGAAAGTGTCTCAAGACTTTGT
CTGCTCATTCTGACCCAGTTTCTGCTGTTCATTTTAATTGTAGTGGGTCCTTGATAGTGTCAGGTAGCTA
TGATGGCCTCTGTAGAATCTGGGATGCTGCATCAGGTCAGTGTTTAAAAACGCTCGTTGATGACGATAAC
CCTCCTGTCTCTTTTGTAAAATTTTCTCCAAATGGTAAATACATTCTCACTGCAACTTTGGACAACACTC
TTAAACTATGGGATTATAGCAGAGGCAGGTGCCTGAAAACATACACTGGTCATAAGAATGAGAAATATTG
CATATTTGCCAATTTTTCAGTTACTGGTGGAAAGTGGATTGTGTCTGGTTCCGAGGATAACCTGGTTTAC
ATTTGGAACCTTCAGACTAAAGAGATTGTGCAGAAATTACAAGGCCATACAGATGTTGTGATCTCAGCAG
CTTGTCATCCTACAGAAAACCTCATCGCATCAGCAGCATTAGAAAATGACAAAACAATTAAACTGTGGAT
GAGTAACCACTAA

Translation (330 aa):
MATKESRDAKAQLALSSSANQSKEVPENPNYALKCTLVGHTEAVSSVKFSPNGEWLASSSADRLIIIWGA
YDGKYEKTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLI
ISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDN
PPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY
IWNLQTKEIVQKLQGHTDVVISAACHPTENLIASAALENDKTIKLWMSNH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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