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Report for CCDS30305.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30305.1 Public Mus musculus X Kif4 23 108 98 CCDS HistoryNCBI Gene:16571Re-query CCDS DB by CCDS ID:30305.1Re-query CCDS DB by GeneID:16571See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30305.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000048962.3 ENSMUSP00000048383.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000048962.3Link to Ensembl Protein Viewer:ENSMUSP00000048383.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000048962Re-query CCDS DB by Protein ID:ENSMUSP00000048383
Original member NCBI NM_008446.2 NP_032472.2 Updated not alive Link to Nucleotide Sequence:NM_008446.2Link to Protein Sequence:NP_032472.2Re-query CCDS DB by Nucleotide ID:NM_008446Re-query CCDS DB by Protein ID:NP_032472
Current member NCBI NM_008446.3 NP_032472.2 Accepted alive Link to Nucleotide Sequence:NM_008446.3Link to Protein Sequence:NP_032472.2Re-query CCDS DB by Nucleotide ID:NM_008446Re-query CCDS DB by Protein ID:NP_032472Link to BLAST:NP_032472.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032472.2 1231 P33174 1231 100% 0 0

Chromosomal Locations for CCDS 30305.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 100626469 100626588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 100626704 100626818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 100633839 100634029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 100635684 100635776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 100638284 100638450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 100638677 100638771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 100664736 100664852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 100665673 100665848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 100669909 100669970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 100677287 100677419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 100679846 100679904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 100680009 100680114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 100689058 100689114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 100690514 100690699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 100694871 100694974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 100695998 100696142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 100697431 100697541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 100704042 100704125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 100704790 100704903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 100711792 100711947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 100712062 100712162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 100713878 100714007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 100715581 100715751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 100716271 100716378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 100717331 100717408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 100717937 100718035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 100718494 100718670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 100724642 100724758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 100726128 100726250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 100726459 100726659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3696 nt):
ATGAAAGAAGAGGTGAAGGGGATTCCCGTAAGAGTGGCACTGCGTTGTCGCCCCCTCGTCTCGAAAGAGA
TTAAGGAGGGCTGCCAGACGTGCCTTTCCTTTGTGCCCGGAGAGCCTCAGGTGGTGGTTGGTAATGATAA
ATCATTTACCTACGATTTTGTGTTTGACCCCTCTACTGAACAGGAAGAGGTCTTTAATACAGCAGTAGCT
CCACTCATAAAAGGCGTGTTTAAAGGATACAATGCAACTGTCCTGGCCTATGGGCAGACTGGATCTGGAA
AAACGTATTCAATGGGAGGTGCATACACTGCAGAACAAGAACATGACTCAGCCATTGGGGTTATTCCCAG
GGTAATACAACTGCTCTTCAAAGAAATTAATAAAAAGAGTGACTTCGAATTTACTCTGAAAGTGTCTTAC
TTGGAGATCTATAATGAAGAAATTTTGGACCTTCTATGTTCATCTCGTGAGAAAGCTACTCAAATAAATA
TCCGGGAGGACCCTAAGGAAGGCATAAAGATTGTGGGACTGACAGAGAAGACTGTGCTGGTGGCCTCGGA
CACCGTTTCCTGTCTAGAGCAGGGTAACAACTCCAGGACTGTGGCCTCCACAGCTATGAACTCCCAGTCA
TCTCGATCTCATGCCATCTTTACAATCTCCATTGAGCAAAGGAAGAAGAATGACAAAAATAGCAGCTTTC
GTTCCAAGCTGCATCTTGTAGACCTCGCTGGATCAGAAAGACAGAAGAAAACCAAGGCTGAGGGAGATCG
ACTGAGAGAGGGTATTAATATTAATCGAGGCCTTCTGTGCTTGGGGAATGTAATCAGTGCTCTTGGAGAT
GATAAAAAGGGTAACTTTGTGCCCTACAGAGATTCCAAGCTGACTCGACTGCTTCAAGATTCTCTAGGAG
GCAATAGCCACACTCTTATGATTGCCTGTGTGAGTCCTGCTGATTCCAATCTAGAAGAAACATTAAATAC
CCTTCGCTATGCTGACAGAGCAAGAAAAATCAAGAACAAACCTATTATTAATATTGATCCCCAGGCAGCT
GAACTAAATCATCTTAAACAACAGGTCCAACAGCTGCAGATCTTGCTGCTACAAGCCCATGGAGGCACCT
TGCCTGGAGATATAAATGTGGAACCATCAGAAAATCTTCAGTCCCTGATGGAGAAGAATCAGTCTCTGGT
GGAAGAGAATGAAAAATTAAGTCGTGGTCTGAGTGAGGCAGCTGGTCAAACAGCCCAGATGCTGGAGAGG
ATCATTCTGACAGAGCAAGCAAATGAGAAAATGAATGCCAAGCTAGAAGAACTCAGGCGGCATGCGGCCT
GTAAAGTGGATCTTCAAAAGCTCGTGGAGACATTGGAAGACCAGGAGTTAAAAGAAAACATAGAGATAAT
TTGCAACCTACAACAAGTGATTGCCCAGCTATCTGATGAAGCTGCTGCTTGCATGACTGCAACCATTGAT
ACTGCAGGGGAAGCAGACACTCAAGTGCAAAGCAGCCCAGATACCAGCAGGTCTTCTGATGTTTTCAGCA
CTCAGCATGCCCTACGCCAAGCTCAGATGTCCAAGGAGCTGATTGAGTTGAATAAAGCACTTGCACTGAA
GGAAGCCCTAGCTAAGAAGATGACTCAGAATGACAACCAACTCCAGCCCATTCAGTTCCAGTACCAGGAT
AATATTAAAAATCTAGAATCAGAAGTCCTCAGTCTACAGAGGGAAAAAGAAGAACTGGTTCTTGAACTTC
AAACAGCAAAGAAGGATGCCAACCAAGCCAAGTTGAGTGAGCGCCGTCGTAAACGTCTTCAGGAACTGGA
GGGTCAAATAGCTGATTTGAAAAAGAAACTGCAAGAACAGTCCAAACTTCTGAAGCTGAAGGAATCCACA
GAGCATACTGTCTCCAAGCTGAACCAGGAGATTCGGATGATGAAAAACCAGCGAGTCCAGTTAATGCGTC
AAATGAAAGAGGATGCTGAGAAGTTTAGGCAATGGAAGCAGCAAAAAGACAAAGAAGTAATCCAGCTAAA
AGAACGGGATCGTAAAAGGCAATATGAGCTGCTCAAACTTGAAAGAAACTTTCAGAAGCAGTCTAATGTG
CTCAGACGTAAAACTGAGGAGGCAGCAGCTGCCAACAAACGTCTTAAGGATGCTCTGCAAAAGCAAAAGG
AGGTTGCAGAAAAACGCAAAGAGACTCAGAGCCGTGGGATGGAAAGCACTGCAGCTAGAATGAAGAATTG
GCTTGGAAATGAAATTGAGGTTATGGTCAGTACTGAGGAAGCCAAGCGACATCTGAATGGCCTTCTTGAA
GAGAGAAAGATCCTGGCTCAGGATGTGGCACAACTCAAAGAGAAAAGAGAATCTGGAGAGAACCCACCTC
TTAAACTCCGAAGGCGCACATTTTCCTACGATGAAATACATGGTCAAGATTCAGGAGCAGAGGATTCTAT
TGCCAAGCAGATTGAAAGCCTAGAGACCGAATTGGAGCTCAGGAGTGCGCAGATTGCGGACCTACAGCAA
AAGCTGCTGGATGCTGAAAGTGAAGACCGGCCGAAACAGCGCTGGGAGAGTATCGCCACAATTCTCGAAG
CCAAATGTGCCATAAAGTATTTAGTGGGAGAGCTCGTCTCCTCCAAAATACTGGTGAGCAAACTAGAAAG
CAGCCTGAATCAGAGCAAGGCCAGCTGTATTGACGTGCAGAAGATGCTGTTTGAGGAGCAAAATCATTTT
GCTAAGATAGAGACAGAGTTAAAAGAAGAGCTGGTCAAAGTGGAGCAACAGCACCAAGAAAAGGTGTTGT
ACCTTCTCAGCCAGCTGCAGCAATCCCAGATGACAGAGAAGCAGCTGGAGGAGTCAGTTAGTGAAAAGGA
ACAGCAGCTGCTGAGCACACTAAAATGTCAGGAGGAAGAGCTTAGGAAGATGCAAGAAGTGTGTGAGCAA
AATCAGCAGCTTCTCCAAGAAAACAGTGCCATCAAGCAGAAACTGACCCTACTCCAAGTAGCCAGCAAAC
AGAAACCCCATCTCACAAGAAATATCTTCCAGTCTCCAGACTCTTCCTTTGAATATATTCCACCTAAGCC
CAAACCTTGCCGCATTAAGGAAAAATGCCTAGAGCAAAGCTTCGCCGTCGAGGGGCTGCAGTATTATTCA
GAGCCTTCTGTGGCCGAGCAGGACAATGAGGACAGTGACGACCATGCTGATGAGGAGTGGATCCCAACAA
AACTAGTCAAGGTGTCCAAGAAGAGCATCCAAGGGTGTTCCTGCAAAGGTTGGTGCGGGAACAAGCAATG
TGGATGCAGAAAGCAAAAGTCAGACTGTAATGTGTCCTGCAGCTGTGACCCCACAAAGTGTCGCAACCGC
CATCAGAACCAGGACAATTCAGATGCTATTGAGCTAAACCAAGATTCTGAAAACTCTTTCAAACTGGAAG
ATCCCACAGAGGTGACCTCAGGCTTAAGCTTCTTCCACCCTATCTGTGCAACTCCCAGTAGCAAGATCCT
AAAAGAAATGTGTGATGCAGATCAGGTGCAGCTGAAGCAGCCCGTGTTTGTCTCTTCTTCTGACCACCCA
GAACTGAAGTCTATAGCGTCAGAATCACAAGAAAATAAGGCCATAGGGAAGAAGAAGAAGCGAGCTCTGG
CCAGCAATACCAGCTTCTTCTCTGGCTGCTCTCCTATCCAAGAAGAGTCCCACTGA

Translation (1231 aa):
MKEEVKGIPVRVALRCRPLVSKEIKEGCQTCLSFVPGEPQVVVGNDKSFTYDFVFDPSTEQEEVFNTAVA
PLIKGVFKGYNATVLAYGQTGSGKTYSMGGAYTAEQEHDSAIGVIPRVIQLLFKEINKKSDFEFTLKVSY
LEIYNEEILDLLCSSREKATQINIREDPKEGIKIVGLTEKTVLVASDTVSCLEQGNNSRTVASTAMNSQS
SRSHAIFTISIEQRKKNDKNSSFRSKLHLVDLAGSERQKKTKAEGDRLREGININRGLLCLGNVISALGD
DKKGNFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNLEETLNTLRYADRARKIKNKPIINIDPQAA
ELNHLKQQVQQLQILLLQAHGGTLPGDINVEPSENLQSLMEKNQSLVEENEKLSRGLSEAAGQTAQMLER
IILTEQANEKMNAKLEELRRHAACKVDLQKLVETLEDQELKENIEIICNLQQVIAQLSDEAAACMTATID
TAGEADTQVQSSPDTSRSSDVFSTQHALRQAQMSKELIELNKALALKEALAKKMTQNDNQLQPIQFQYQD
NIKNLESEVLSLQREKEELVLELQTAKKDANQAKLSERRRKRLQELEGQIADLKKKLQEQSKLLKLKEST
EHTVSKLNQEIRMMKNQRVQLMRQMKEDAEKFRQWKQQKDKEVIQLKERDRKRQYELLKLERNFQKQSNV
LRRKTEEAAAANKRLKDALQKQKEVAEKRKETQSRGMESTAARMKNWLGNEIEVMVSTEEAKRHLNGLLE
ERKILAQDVAQLKEKRESGENPPLKLRRRTFSYDEIHGQDSGAEDSIAKQIESLETELELRSAQIADLQQ
KLLDAESEDRPKQRWESIATILEAKCAIKYLVGELVSSKILVSKLESSLNQSKASCIDVQKMLFEEQNHF
AKIETELKEELVKVEQQHQEKVLYLLSQLQQSQMTEKQLEESVSEKEQQLLSTLKCQEEELRKMQEVCEQ
NQQLLQENSAIKQKLTLLQVASKQKPHLTRNIFQSPDSSFEYIPPKPKPCRIKEKCLEQSFAVEGLQYYS
EPSVAEQDNEDSDDHADEEWIPTKLVKVSKKSIQGCSCKGWCGNKQCGCRKQKSDCNVSCSCDPTKCRNR
HQNQDNSDAIELNQDSENSFKLEDPTEVTSGLSFFHPICATPSSKILKEMCDADQVQLKQPVFVSSSDHP
ELKSIASESQENKAIGKKKKRALASNTSFFSGCSPIQEESH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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